RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 TMEM183BQ1AE95 376 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 UTS2BQ765I0 119 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 PPP1R42Q7Z4L9 355 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 THOC6Q86W42 341 aaKnown RBP2.4□□□□□ -2.03
USP40-209ENST00000452724 TMEM183AQ8IXX5 376 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 SAXO1Q8IYX7 474 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 FAM83FQ8NEG4 500 aaPredicted RBP2.4□□□□□ -2.03
USP40-209ENST00000452724 ZNF596Q8TC21 504 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 FAM110BQ8TC76 370 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 UBE2Q2Q8WVN8 375 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 SMARCD2Q92925 531 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.4□□□□□ -2.03
USP40-209ENST00000452724 TAAR1Q96RJ0 339 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 ECSITQ9BQ95 431 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 DNTTIP1Q9H147 329 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 VCX2Q9H322 139 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 TPK1Q9H3S4 243 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 MRPL47Q9HD33 250 aaKnown RBP2.4□□□□□ -2.03
USP40-209ENST00000452724 CYTL1Q9NRR1 136 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 SPATA7Q9P0W8 599 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 XCL2Q9UBD3 114 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 PCYOX1Q9UHG3 505 aa2.4□□□□□ -2.03
USP40-209ENST00000452724 ATP10AO60312 1499 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 MYO10Q9HD67 2058 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 IGLV3-22A0A075B6J6 115 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 PCP4L1A6NKN8 68 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 GPR89AB7ZAQ6 455 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 GOLGA8SH3BPF8 625 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 DLGAP1O14490 977 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 ZNF324O75467 553 aaPredicted RBP2.39□□□□□ -2.03
USP40-209ENST00000452724 CSF3P09919 207 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 GPR89BP0CG08 455 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 CNR1P21554 472 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 PRPHP41219 470 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 HNMTP50135 292 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 GBX2P52951 348 aaPredicted RBP2.39□□□□□ -2.03
USP40-209ENST00000452724 ACTA1P68133 377 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 SMARCB1Q12824 385 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 GPM6BQ13491 265 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 FZD2Q14332 565 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 GNMTQ14749 295 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 C16orf72Q14CZ0 275 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 GUCA2BQ16661 112 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 RSPO1Q2MKA7 263 aaPredicted RBP2.39□□□□□ -2.03
USP40-209ENST00000452724 LRRC23Q53EV4 343 aaPredicted RBP2.39□□□□□ -2.03
USP40-209ENST00000452724 COA6Q5JTJ3 125 aaKnown RBP2.39□□□□□ -2.03
USP40-209ENST00000452724 LRRC75A-AS1Q8N1F1 130 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 ZADH2Q8N4Q0 377 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 STARD8Q92502 1023 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 SLC41A3Q96GZ6 507 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 FOPNLQ96NB1 174 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 PPA2Q9H2U2 334 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 AZI2Q9H6S1 392 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 CTPS2Q9NRF8 586 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 EXD2Q9NVH0 621 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 CLEC4AQ9UMR7 237 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 N6AMT1Q9Y5N5 214 aa2.39□□□□□ -2.03
USP40-209ENST00000452724 IGLV11-55A0A075B6I3 123 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 IGKV2-28A0A075B6P5 120 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 SNTNA6NMZ2 147 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 TIMM8AO60220 97 aaPredicted RBP2.38□□□□□ -2.03
USP40-209ENST00000452724 FCMRO60667 390 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 WISP3O95389 354 aaPredicted RBP2.38□□□□□ -2.03
USP40-209ENST00000452724 IGKV2D-28P01615 120 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 IGLV2-23P01705 113 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 IGHV3-43DP0DP04 118 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 TCN1P20061 433 aaPredicted RBP2.38□□□□□ -2.03
USP40-209ENST00000452724 SLC2A5P22732 501 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 CD1CP29017 333 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 FDFT1P37268 417 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 SSR1P43307 286 aaKnown RBP2.38□□□□□ -2.03
USP40-209ENST00000452724 RPS9P46781 194 aaKnown RBP2.38□□□□□ -2.03
USP40-209ENST00000452724 FGF8P55075 233 aaPredicted RBP2.38□□□□□ -2.03
USP40-209ENST00000452724 UBE2HP62256 183 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 OGDHQ02218 1023 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 IL24Q13007 206 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 ANKDD1AQ495B1 522 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 CNIH2Q6PI25 160 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 UQCC3Q6UW78 93 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 C12orf56Q8IXR9 622 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 DNAJC19Q96DA6 116 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 MS4A4EQ96PG1 132 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 PSKH2Q96QS6 385 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 TRIM62Q9BVG3 475 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 FAIM2Q9BWQ8 316 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 NIPAL2Q9H841 368 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 NMRAL1Q9HBL8 299 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 SLCO1B3Q9NPD5 702 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 ADAP2Q9NPF8 381 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 LHX9Q9NQ69 397 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 PIGLQ9Y2B2 252 aa2.38□□□□□ -2.03
USP40-209ENST00000452724 PPIAL4EA0A075B759 164 aa2.37□□□□□ -2.03
USP40-209ENST00000452724 IGKV6-21A0A0C4DH24 114 aa2.37□□□□□ -2.03
USP40-209ENST00000452724 A0A1B0GVL5 298 aa2.37□□□□□ -2.03
USP40-209ENST00000452724 PRSS37A4D1T9 235 aa2.37□□□□□ -2.03
USP40-209ENST00000452724 H3BNH8 94 aa2.37□□□□□ -2.03
USP40-209ENST00000452724 XKRYO14609 159 aa2.37□□□□□ -2.03
USP40-209ENST00000452724 CD5LO43866 347 aa2.37□□□□□ -2.03
USP40-209ENST00000452724 B4GALT2O60909 372 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms