RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 CDH10Q9Y6N8 788 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 NBASA2RRP1 2371 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 PDLIM1O00151 329 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 TNFSF13O75888 250 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 IGHMP01871 453 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 TP53P04637 393 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 ALPLP05186 524 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 OSMP13725 252 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 HLA-DOBP13765 273 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 APEHP13798 732 aaKnown RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 CTSSP25774 331 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 AGTR1P30556 359 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 KIR2DL2P43627 348 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 ALDH3A2P51648 485 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 POU3F1Q03052 451 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 DAG1Q14118 895 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 DPY19L2P2Q6ZN68 376 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 GALNT5Q7Z7M9 940 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 FJX1Q86VR8 437 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 KIF18BQ86Y91 864 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 GCNT2Q8N0V5 402 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 CBR4Q8N4T8 237 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 OR6K3Q8NGY3 331 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 INTS12Q96CB8 462 aaKnown RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 SMURF2Q9HAU4 748 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 NRIP3Q9NQ35 241 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 KRT84Q9NSB2 600 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 PARPBPQ9NWS1 579 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 NKX1-2Q9UD57 310 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 ENOPH1Q9UHY7 261 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 TMEFF2Q9UIK5 374 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 RCE1Q9Y256 329 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 NCOA6Q14686 2063 aaPredicted RBP10.28□□□□□ -0.76
SCN9A-204ENST00000452182 A0A1W2PRG6 482 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 MCIDASD6RGH6 385 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 C11orf98E9PRG8 122 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 EI24O14681 340 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 AKAP8O43823 692 aaKnown RBP10.28□□□□□ -0.76
SCN9A-204ENST00000452182 ATP6V1G2O95670 118 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 F13BP05160 661 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 CD14P08571 375 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 PLA2G2AP14555 144 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 IGFBP5P24593 272 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 SLC6A6P31641 620 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 OPRM1P35372 400 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 DAP3P51398 398 aaKnown RBP10.28□□□□□ -0.76
SCN9A-204ENST00000452182 IL1RL1Q01638 556 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 FOXF2Q12947 444 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 C1DQ13901 141 aaKnown RBP10.28□□□□□ -0.76
SCN9A-204ENST00000452182 TRIP10Q15642 601 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 OGFRL1Q5TC84 451 aaPredicted RBP10.28□□□□□ -0.76
SCN9A-204ENST00000452182 ANKRD34AQ69YU3 496 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 ZBTB49Q6ZSB9 765 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 SLC35D2Q76EJ3 337 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF511Q8NB15 262 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 CCDC120Q96HB5 630 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 ADAD1Q96M93 576 aaKnown RBP10.28□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF385AQ96PM9 386 aaKnown RBP10.28□□□□□ -0.76
SCN9A-204ENST00000452182 ENKD1Q9H0I2 346 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 TXNIPQ9H3M7 391 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 EGLN3Q9H6Z9 239 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 PLSCR4Q9NRQ2 329 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 CLEC4AQ9UMR7 237 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 SLC5A6Q9Y289 635 aa10.28□□□□□ -0.76
SCN9A-204ENST00000452182 NOSIPQ9Y314 301 aaKnown RBP10.28□□□□□ -0.76
SCN9A-204ENST00000452182 SOCS2O14508 198 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 IMPA2O14732 288 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 ARPC3O15145 178 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 MRPL33O75394 65 aaKnown RBP10.27□□□□□ -0.77
SCN9A-204ENST00000452182 ZNF432O94892 652 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 BCL10O95999 233 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 CD8BP10966 210 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 IFNGR1P15260 489 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 NTF4P34130 210 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 RPL4P36578 427 aaKnown RBP10.27□□□□□ -0.77
SCN9A-204ENST00000452182 CTXN1P60606 82 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 ESRRGP62508 458 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 ADORA2A-AS1P86434 159 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 ACKR1Q16570 336 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 SLC36A3Q495N2 470 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 ARMC4Q5T2S8 1044 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 FAM205BPQ63HN1 556 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 GPR139Q6DWJ6 353 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 NCCRP1Q6ZVX7 275 aaPredicted RBP10.27□□□□□ -0.77
SCN9A-204ENST00000452182 FAM122BQ7Z309 247 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 HDDC2Q7Z4H3 204 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 PACRGLQ8N7B6 248 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 OR52L1Q8NGH7 329 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 OR6X1Q8NH79 312 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 MAGEE2Q8TD90 523 aaPredicted RBP10.27□□□□□ -0.77
SCN9A-204ENST00000452182 STARD4Q96DR4 205 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 SAMD8Q96LT4 415 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 KATNB1Q9BVA0 655 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 PLA2G12AQ9BZM1 189 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 COQ3Q9NZJ6 369 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 ERRFI1Q9UJM3 462 aaPredicted RBP10.27□□□□□ -0.77
SCN9A-204ENST00000452182 BAIAP2Q9UQB8 552 aa10.27□□□□□ -0.77
SCN9A-204ENST00000452182 HIVEP3Q5T1R4 2406 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 UBR5O95071 2799 aaPredicted RBP10.26□□□□□ -0.77
SCN9A-204ENST00000452182 OR6C65A6NJZ3 312 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms