RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 NAAAQ02083 359 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 POU3F1Q03052 451 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-208ENST00000452047 PUDPQ08623 228 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 RAB35Q15286 201 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 SWI5Q1ZZU3 235 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 PHYHD1Q5SRE7 291 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 CGB2Q6NT52 195 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 PATL1Q86TB9 770 aaKnown RBP10.85□□□□□ -0.67
CPSF4-208ENST00000452047 MYPOPQ86VE0 399 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-208ENST00000452047 RBM45Q8IUH3 476 aaKnown RBP10.85□□□□□ -0.67
CPSF4-208ENST00000452047 UEVLDQ8IX04 471 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 GPR137CQ8N3F9 429 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 ZNF525Q8N782 197 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 OR10A6Q8NH74 314 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 ADAMTS16Q8TE57 1224 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 ZNF426Q9BUY5 554 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 ASPNQ9BXN1 380 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 PCDHAC1Q9H158 963 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 MOV10Q9HCE1 1003 aaKnown RBP10.85□□□□□ -0.67
CPSF4-208ENST00000452047 CA10Q9NS85 328 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 MXRA5Q9NR99 2828 aa10.85□□□□□ -0.67
CPSF4-208ENST00000452047 ATRQ13535 2644 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 CPSF4LA6NMK7 179 aaKnown RBP10.84□□□□□ -0.67
CPSF4-208ENST00000452047 ZNF99A8MXY4 864 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-208ENST00000452047 PLPP3O14495 311 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 MT-ATP6P00846 226 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 CRYAAP02489 173 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 CELA3BP08861 270 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 CALCRP30988 508 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 IL1RL1Q01638 556 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 CHRNB3Q05901 458 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 PMS2P3Q13401 168 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 VMACQ2NL98 169 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 RABL3Q5HYI8 236 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 COQ5Q5HYK3 327 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 ENTPD8Q5MY95 495 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 INTS11Q5TA45 600 aaKnown RBP10.84□□□□□ -0.67
CPSF4-208ENST00000452047 NANOGP8Q6NSW7 305 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 CLEC2AQ6UVW9 174 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 CCDC80Q76M96 950 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 PXKQ7Z7A4 578 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 CALHM3Q86XJ0 350 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 C20orf196Q8IYI0 205 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 LRR1Q96L50 414 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 RHNO1Q9BSD3 238 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 EMC6Q9BV81 110 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 NANOGQ9H9S0 305 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 FGFR1OP2Q9NVK5 253 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 MED29Q9NX70 200 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 NOX1Q9Y5S8 564 aa10.84□□□□□ -0.67
CPSF4-208ENST00000452047 SLC35F4A4IF30 521 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 M0R3G1 203 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 CD5LO43866 347 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 CRLF1O75462 422 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 SEC14L2O76054 403 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 PDE5AO76074 875 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 BMP4P12644 408 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 CBR1P16152 277 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 EFNA4P52798 201 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 DSCR9P59020 149 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 KLF10Q13118 480 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 ADIPOQQ15848 244 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF74Q16587 644 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 CARD17Q5XLA6 110 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF627Q7L945 461 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 OR8J3Q8NGG0 315 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 OR5J2Q8NH18 312 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 VANGL1Q8TAA9 524 aaPredicted RBP10.83□□□□□ -0.68
CPSF4-208ENST00000452047 LRRC58Q96CX6 371 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 FBXO17Q96EF6 278 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 TXNDC15Q96J42 360 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 KCNS3Q9BQ31 491 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 SAR1AQ9NR31 198 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 MRGBPQ9NV56 204 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF446Q9NWS9 450 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 ADAM21Q9UKJ8 722 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 SLC7A7Q9UM01 511 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 PMF1-BGLAPU3KQ54 211 aa10.83□□□□□ -0.68
CPSF4-208ENST00000452047 IGHV2OR16-5A0A0B4J2B6 119 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 TRAPPC13A5PLN9 417 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 KIAA1324LA8MWY0 1029 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-208ENST00000452047 TLX2O43763 284 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-208ENST00000452047 GPRIN2O60269 458 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 LY6HO94772 140 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 NPPAP01160 153 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 TROVE2P10155 538 aaKnown RBP eCLIP10.82□□□□□ -0.68
CPSF4-208ENST00000452047 SERPINF1P36955 418 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 IDH3GP51553 393 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-208ENST00000452047 HGFACQ04756 655 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 CAMK2DQ13557 499 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 CYLC2Q14093 348 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-208ENST00000452047 EFNB3Q15768 340 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 REP15Q6BDI9 236 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 MDP1Q86V88 176 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 CCDC36Q8IYA8 594 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 C10orf53Q8N6V4 93 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 NUP37Q8NFH4 326 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 OR4F15Q8NGB8 312 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 C10orf105Q8TEF2 133 aa10.82□□□□□ -0.68
CPSF4-208ENST00000452047 RASSF5Q8WWW0 418 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms