RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 MED29Q9NX70 200 aa7.57□□□□□ -1.2
RFX3-209ENST00000451859 B3GAT1Q9P2W7 334 aa7.57□□□□□ -1.2
RFX3-209ENST00000451859 A0A087WUJ7 227 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 C11orf98E9PRG8 122 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 M0QX08 132 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 M0R3G1 203 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 TRAF3IP2O43734 574 aaPredicted RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 AKAP8O43823 692 aaKnown RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 LY6HO94772 140 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 ZNF432O94892 652 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 BGLAPP02818 100 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 VIMP08670 466 aaKnown RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 CELA3BP08861 270 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 TROVE2P10155 538 aaKnown RBP eCLIP7.56□□□□□ -1.2
RFX3-209ENST00000451859 AHCYP23526 432 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 IDH3GP51553 393 aaPredicted RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 PCBP3P57721 371 aaKnown RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 ARF1P84077 181 aaKnown RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 NPRL3Q12980 569 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 PMS2P3Q13401 168 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 ETFDHQ16134 617 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 NRF1Q16656 503 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 CEACAM16Q2WEN9 425 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 MMEL1Q495T6 779 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 ENTPD8Q5MY95 495 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 PHYHD1Q5SRE7 291 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 FAM91A1Q658Y4 838 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 C11orf71Q6IPW1 123 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 C5orf46Q6UWT4 87 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 H1FNTQ75WM6 255 aaPredicted RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 RBM45Q8IUH3 476 aaKnown RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 DPP10Q8N608 796 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 ZNF525Q8N782 197 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 PIK3C3Q8NEB9 887 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 BHLHE22Q8NFJ8 381 aaPredicted RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 GPR32P1Q8NGA4 272 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 OR4D11Q8NGI4 311 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 OR6T1Q8NGN1 323 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 BCL2L2Q92843 193 aaPredicted RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 TAMM41Q96BW9 452 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 TXNDC15Q96J42 360 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 SLC38A2Q96QD8 506 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 OR2M2Q96R28 347 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 EPYCQ99645 322 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 ARHGDIGQ99819 225 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 LINC00470Q9BZP3 86 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 NELFAQ9H3P2 528 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 BARX1Q9HBU1 254 aaPredicted RBP7.56□□□□□ -1.2
RFX3-209ENST00000451859 CRLF2Q9HC73 371 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 GPR35Q9HC97 309 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 TPSG1Q9NRR2 321 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 USP22Q9UPT9 525 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 RCE1Q9Y256 329 aa7.56□□□□□ -1.2
RFX3-209ENST00000451859 IGHV4-30-2A0A087WSY4 118 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 OR6C65A6NJZ3 312 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 MS4A18H0YCH9 400 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 FBP2O00757 339 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 MRASO14807 208 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 SHOX2O60902 331 aaPredicted RBP7.55□□□□□ -1.2
RFX3-209ENST00000451859 CH25HO95992 272 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 CRYAAP02489 173 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 TP53P04637 393 aaPredicted RBP7.55□□□□□ -1.2
RFX3-209ENST00000451859 CECR9P0C854 216 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 UMPSP11172 480 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 TNFRSF1BP20333 461 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 APOBEC3AP31941 199 aaPredicted RBP7.55□□□□□ -1.2
RFX3-209ENST00000451859 PCGF2P35227 344 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 ARFIP2P53365 341 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 SH3BGRP55822 239 aaPredicted RBP7.55□□□□□ -1.2
RFX3-209ENST00000451859 CHRNB3Q05901 458 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 KRTAP1-1Q07627 177 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 PUDPQ08623 228 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 RBBP4Q09028 425 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 CAMK2DQ13557 499 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 RAB35Q15286 201 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 NPTX1Q15818 432 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 CARTPTQ16568 116 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 TRMT5Q32P41 509 aaKnown RBP7.55□□□□□ -1.2
RFX3-209ENST00000451859 MS4A18Q3C1V0 323 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 KRTAP21-3Q3LHN1 58 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 RABL3Q5HYI8 236 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 REP15Q6BDI9 236 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 ZNF544Q6NX49 715 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 ANKRD16Q6P6B7 361 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 CLEC2AQ6UVW9 174 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 WDR88Q6ZMY6 472 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 NET1Q7Z628 596 aaPredicted RBP7.55□□□□□ -1.2
RFX3-209ENST00000451859 PATL1Q86TB9 770 aaKnown RBP7.55□□□□□ -1.2
RFX3-209ENST00000451859 MYPOPQ86VE0 399 aaPredicted RBP7.55□□□□□ -1.2
RFX3-209ENST00000451859 SNX32Q86XE0 403 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 WDFY1Q8IWB7 410 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 OR6N1Q8NGY5 312 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 VRK1Q99986 396 aaPredicted RBP7.55□□□□□ -1.2
RFX3-209ENST00000451859 SIKE1Q9BRV8 207 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 RHNO1Q9BSD3 238 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 KAT8Q9H7Z6 458 aaKnown RBP7.55□□□□□ -1.2
RFX3-209ENST00000451859 YAE1D1Q9NRH1 226 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 PRDM4Q9UKN5 801 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 SLC7A7Q9UM01 511 aa7.55□□□□□ -1.2
RFX3-209ENST00000451859 GMEB1Q9Y692 573 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms