RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 STK32CQ86UX6 486 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 ZDHHC13Q8IUH4 622 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 PIGXQ8TBF5 258 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 SLC7A13Q8TCU3 470 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 GIPC3Q8TF64 312 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 TMEM255BQ8WV15 326 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 MBD6Q96DN6 1003 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 HS3ST6Q96QI5 342 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 MRPS26Q9BYN8 205 aaKnown RBP15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 POTEKPQ9BYX7 375 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 KLHL13Q9P2N7 655 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 TMEM5Q9Y2B1 443 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 A0A087WUU8 490 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 TRBV4-1A0A0J9YWV2 114 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 SH3PXD2BA1X283 911 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 G3V2T6 193 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 OR2T1O43869 369 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 OR10H3O60404 316 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 AHSA1O95433 338 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 IGF2P01344 180 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 CD99P14209 185 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 LIMS1P48059 325 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 RAC3P60763 192 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 MICAQ29983 383 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 SYT14P1Q58G82 188 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 SHQ1Q6PI26 577 aaKnown RBP15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 CXorf67Q86X51 503 aaPredicted RBP15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 TGIF2LYQ8IUE0 185 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 CBR4Q8N4T8 237 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 OR4C15Q8NGM1 316 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 ZNF426Q9BUY5 554 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 TAPBPLQ9BX59 468 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 ZNF696Q9H7X3 374 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 UBTD1Q9HAC8 227 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 NTN4Q9HB63 628 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 PDP1Q9P0J1 537 aaPredicted RBP15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 HDGFL3Q9Y3E1 203 aa15.1■□□□□ 0.01
PRPF40A-204ENST00000450303 TRAV36DV7A0A075B6V5 113 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 SMAD9O15198 467 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 YES1P07947 543 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 LOXP28300 417 aaPredicted RBP15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 DIO1P49895 249 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 UGT2B15P54855 530 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 RASGEF1BQ0VAM2 473 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 PPP1R8Q12972 351 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 MFSD13AQ14CX5 517 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 C1orf140Q5VVS0 124 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 TFAP2EQ6VUC0 442 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 WDR88Q6ZMY6 472 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 WFDC8Q8IUA0 241 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 OR10G2Q8NGC3 310 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 OR4K5Q8NGD3 323 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 OR6S1Q8NH40 331 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 PSD2Q9BQI7 771 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 FUZQ9BT04 418 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 TMUB1Q9BVT8 246 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 OSBPL10Q9BXB5 764 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 ACTR6Q9GZN1 396 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 ZNF556Q9HAH1 456 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 FANCFQ9NPI8 374 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 VNN3Q9NY84 501 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 ING1Q9UK53 422 aaPredicted RBP15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 OAZ3Q9UMX2 235 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 MGAT4BQ9UQ53 548 aa15.09■□□□□ 0.01
PRPF40A-204ENST00000450303 ARRDC5A6NEK1 342 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 SULT2B1O00204 365 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 SOCS2O14508 198 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 KLF4O43474 513 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 HPRP00739 348 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 IFI30P13284 250 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 ANXA8P13928 327 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 GTF2E2P29084 291 aaKnown RBP15.08■□□□□ 0
PRPF40A-204ENST00000450303 IDUAP35475 653 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 ADAM8P78325 824 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 PRKCDQ05655 676 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 TBPL2Q6SJ96 375 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 TMPPEQ6ZT21 453 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 NRMQ8IXM6 262 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 SLC43A2Q8N370 569 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 DHRSXQ8N5I4 330 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 C10orf53Q8N6V4 93 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 GNPDA2Q8TDQ7 276 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 SGTBQ96EQ0 304 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 RDH12Q96NR8 316 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 SLC29A1Q99808 456 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 ANKRD60Q9BZ19 345 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 OR11A1Q9GZK7 315 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 SMPD3Q9NY59 655 aaPredicted RBP15.08■□□□□ 0
PRPF40A-204ENST00000450303 KIF17Q9P2E2 1029 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 KLHL9Q9P2J3 617 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 PRSS50Q9UI38 385 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 GPR52Q9Y2T5 361 aa15.08■□□□□ 0
PRPF40A-204ENST00000450303 DSCAMO60469 2012 aa15.07■□□□□ 0
PRPF40A-204ENST00000450303 SMIM31A0A1B0GVY4 71 aa15.07■□□□□ 0
PRPF40A-204ENST00000450303 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.07■□□□□ 0
PRPF40A-204ENST00000450303 KPNA4O00629 521 aaPredicted RBP15.07■□□□□ 0
PRPF40A-204ENST00000450303 CYTIPO60759 359 aa15.07■□□□□ 0
PRPF40A-204ENST00000450303 ADAP00813 363 aa15.07■□□□□ 0
PRPF40A-204ENST00000450303 MT-ATP6P00846 226 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms