RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 ANPEPP15144 967 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 GRPRP30550 384 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 PRKAR1BP31321 381 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 RPS23P62266 143 aaKnown RBP11.48□□□□□ -0.57
HMGB3-204ENST00000448905 FADDQ13158 208 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 ALG10BQ5I7T1 473 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 FAM91A1Q658Y4 838 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 C6orf89Q6UWU4 347 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 GLCCI1Q86VQ1 547 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 C20orf196Q8IYI0 205 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 TEX29Q8N6K0 151 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 ADPRHL1Q8NDY3 354 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 OR6N1Q8NGY5 312 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 OR6S1Q8NH40 331 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 ZNF417Q8TAU3 575 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 RDH5Q92781 318 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 C1orf159Q96HA4 380 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 ZNF587Q96SQ5 575 aaPredicted RBP11.48□□□□□ -0.57
HMGB3-204ENST00000448905 SOX7Q9BT81 388 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 NELFAQ9H3P2 528 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 SEC61A2Q9H9S3 476 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 SLC6A13Q9NSD5 602 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 GRIP1Q9Y3R0 1128 aa11.48□□□□□ -0.57
HMGB3-204ENST00000448905 PRORSD1PA6NEY8 169 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 SERPINB7O75635 380 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 RAB36O95755 333 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 HLA-HP01893 362 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 GLRXP35754 106 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 GPR6P46095 362 aaPredicted RBP11.47□□□□□ -0.57
HMGB3-204ENST00000448905 NCALDP61601 193 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 RAB1AP62820 205 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 PIGFQ07326 219 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 PMS2P3Q13401 168 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 CARD17Q5XLA6 110 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 ZNF813Q6ZN06 617 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 CDK20Q8IZL9 346 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 C10orf53Q8N6V4 93 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 GOLGA6L1Q8N7Z2 621 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 BHLHE22Q8NFJ8 381 aaPredicted RBP11.47□□□□□ -0.57
HMGB3-204ENST00000448905 ZFAND2BQ8WV99 257 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 MRPL24Q96A35 216 aaKnown RBP11.47□□□□□ -0.57
HMGB3-204ENST00000448905 ZNF837Q96EG3 531 aaPredicted RBP11.47□□□□□ -0.57
HMGB3-204ENST00000448905 ZNF607Q96SK3 696 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 TPK1Q9H3S4 243 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 EVA1AQ9H8M9 152 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 B3GNT2Q9NY97 397 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 B3GAT1Q9P2W7 334 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 CHST2Q9Y4C5 530 aa11.47□□□□□ -0.57
HMGB3-204ENST00000448905 A0A087WUJ7 227 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 A0A1B0GWA3 101 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 SLC22A23A1A5C7 686 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 MS4A18H0YCH9 400 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 SNNO75324 88 aaPredicted RBP11.46□□□□□ -0.57
HMGB3-204ENST00000448905 OR6A2O95222 327 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 CBLP22681 906 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 PPIBP23284 216 aaKnown RBP11.46□□□□□ -0.57
HMGB3-204ENST00000448905 AHCYP23526 432 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 IL2RGP31785 369 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 STX1BP61266 288 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 CCNIQ14094 377 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 MS4A18Q3C1V0 323 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 REEP3Q6NUK4 255 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 SHQ1Q6PI26 577 aaKnown RBP11.46□□□□□ -0.57
HMGB3-204ENST00000448905 PIWIL3Q7Z3Z3 882 aaKnown RBP11.46□□□□□ -0.57
HMGB3-204ENST00000448905 TMEM123Q8N131 208 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 SCAIQ8N9R8 606 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 ZNF418Q8TF45 676 aaPredicted RBP11.46□□□□□ -0.57
HMGB3-204ENST00000448905 GTF2H4Q92759 462 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 MAL2Q969L2 176 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 VPS33AQ96AX1 596 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 MAELQ96JY0 434 aaKnown RBP11.46□□□□□ -0.57
HMGB3-204ENST00000448905 ULBP2Q9BZM5 246 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 NKIRAS1Q9NYS0 192 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 SEC14L4Q9UDX3 406 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 DUSP13Q9UII6 198 aa11.46□□□□□ -0.57
HMGB3-204ENST00000448905 ZNF346Q9UL40 294 aaKnown RBP11.46□□□□□ -0.57
HMGB3-204ENST00000448905 LYNX1G3V0Z9 82 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 UBL3O95164 117 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 TFP02787 698 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 VIMP08670 466 aaKnown RBP11.45□□□□□ -0.58
HMGB3-204ENST00000448905 NUDT7P0C024 238 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 LYNX1P0DP58 116 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 BMP2P12643 396 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 ZNF35P13682 527 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 ITGA2P17301 1181 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 TCN1P20061 433 aaPredicted RBP11.45□□□□□ -0.58
HMGB3-204ENST00000448905 ACHEP22303 614 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 PTDSS1P48651 473 aaKnown RBP11.45□□□□□ -0.58
HMGB3-204ENST00000448905 MRPS11P82912 194 aaKnown RBP11.45□□□□□ -0.58
HMGB3-204ENST00000448905 RUNX1T1Q06455 604 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 CAMK2DQ13557 499 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 TRIP10Q15642 601 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 MOGQ16653 247 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 GTDC1Q4AE62 458 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 GLIPR1L2Q4G1C9 344 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 TNFAIP8L3Q5GJ75 292 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 DHRS4L2Q6PKH6 230 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 RINLQ6ZS11 566 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 ZNF627Q7L945 461 aa11.45□□□□□ -0.58
HMGB3-204ENST00000448905 PXKQ7Z7A4 578 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms