RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 UGT2B15P54855 530 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 TRAM2Q15035 370 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 RCN1Q15293 331 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 TAB1Q15750 504 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 ATP6AP1Q15904 470 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 ELOA3BQ3SY89 546 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 ALKBH2Q6NS38 261 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 ZFP1Q6P2D0 407 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 PODNL1Q6PEZ8 512 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 HS3ST5Q8IZT8 346 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 ELOA3Q8NG57 546 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 OR4C15Q8NGM1 316 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 LILRB1Q8NHL6 650 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 SMAP2Q8WU79 429 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 DNAJA4Q8WW22 397 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 SLC38A4Q969I6 547 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 GTPBP3Q969Y2 492 aaKnown RBP12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 ZNF347Q96SE7 839 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 FUZQ9BT04 418 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 SRXN1Q9BYN0 137 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 BCO1Q9HAY6 547 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 KLHL9Q9P2J3 617 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 SAMHD1Q9Y3Z3 626 aaKnown RBP12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 MAGED1Q9Y5V3 778 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 LYVE1Q9Y5Y7 322 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 COL6A5A8TX70 2615 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 HEATR1Q9H583 2144 aaKnown RBP12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 A0A087WUJ7 227 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 A0A1W2PNR3 127 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 TNFRSF11BO00300 401 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 CLOCKO15516 846 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 DANCRP0C864 163 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 CXCR1P25024 350 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 EGR4Q05215 589 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 ST3GAL3Q11203 375 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 SELENBP1Q13228 472 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 ZNF672Q499Z4 452 aaPredicted RBP12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 LINC00114Q6XXX2 140 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 Q6ZT83 130 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 P2RY8Q86VZ1 359 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 PFN4Q8NHR9 129 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 POP5Q969H6 163 aaKnown RBP12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 ARL5BQ96KC2 179 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 POTEKPQ9BYX7 375 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 REG4Q9BYZ8 158 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 REEP1Q9H902 201 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 SELENONQ9NZV5 590 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 DNAJB9Q9UBS3 223 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 NKX1-2Q9UD57 310 aaPredicted RBP12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 CHRNA9Q9UGM1 479 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 ATRQ13535 2644 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 DNHD1Q96M86 4753 aa12.13□□□□□ -0.47
PDLIM2-213ENST00000448520 PLCE1Q9P212 2302 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 A0A087WUU8 490 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 SAC3D1A6NKF1 404 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 ZNF814B7Z6K7 855 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 LRRN3E7EW58 273 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 GNGT2O14610 69 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 TP53P04637 393 aaPredicted RBP12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 SOD3P08294 240 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 TFPIP10646 304 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 ENPP1P22413 925 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 CBLP22681 906 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 FASP25445 335 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 APOBEC1P41238 236 aaKnown RBP12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 OR3A2P47893 321 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 LIMS1P48059 325 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 RASGEF1BQ0VAM2 473 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 TSC22D1Q15714 1073 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 BHLHA15Q7RTS1 189 aaPredicted RBP12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 PQLC1Q8N2U9 271 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 ICA1LQ8NDH6 482 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 SLC7A13Q8TCU3 470 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 MUCL1Q96DR8 90 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 KTI12Q96EK9 354 aaPredicted RBP12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 POLR2J2Q9GZM3 115 aaKnown RBP12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 POLR2J3Q9H1A7 115 aaKnown RBP12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 YY1AP1Q9H869 796 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 COQ10BQ9H8M1 238 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 MEPEQ9NQ76 525 aaPredicted RBP12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 SERINC1Q9NRX5 453 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 C20orf141Q9NUB4 165 aa12.12□□□□□ -0.47
PDLIM2-213ENST00000448520 A0A1W2PRQ8 180 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 SH3PXD2BA1X283 911 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 DPRXA6NFQ7 191 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 ZNF724A8MTY0 619 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 RNF223E7ERA6 249 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 TLX2O43763 284 aaPredicted RBP12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 DEAF1O75398 565 aaPredicted RBP12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 THRBP10828 461 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 PNMTP11086 282 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 ANPEPP15144 967 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 FUT1P19526 365 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 PRKACGP22612 351 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 HTR3AP46098 478 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 RPS5P46782 204 aaKnown RBP12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 BSPH1Q075Z2 132 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 DGCR6Q14129 220 aa12.11□□□□□ -0.47
PDLIM2-213ENST00000448520 SYT14P1Q58G82 188 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms