RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SLC17A5Q9NRA2 495 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 DCAF13Q9NV06 445 aaKnown RBP13.01□□□□□ -0.33
HDAC4-204ENST00000446876 MED31Q9Y3C7 131 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 NOX1Q9Y5S8 564 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 A0A096LPE4 126 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 A0A1W2PPZ6 126 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 BLOC1S5-TXNDC5H3BN57 136 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 hCG_2039718K7EN88 272 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 M0R3G1 203 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 RNF13O43567 381 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 AKAP8O43823 692 aaKnown RBP13□□□□□ -0.33
HDAC4-204ENST00000446876 GMNNO75496 209 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 SEC14L2O76054 403 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 DIRAS1O95057 198 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 PRSS23O95084 383 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 HIST1H2ABP04908 130 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 CD3EP07766 207 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 T-ENOLP0DO92 83 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 IFNGR1P15260 489 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 CD53P19397 219 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 BIDP55957 195 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 TUBA1BP68363 451 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 TUBA4AP68366 448 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 TGFBR3Q03167 851 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 SPOCK1Q08629 439 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 TESK1Q15569 626 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 FXNQ16595 210 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 HMBOX1Q6NT76 420 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 ADAM5Q6NVV9 412 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 TUBA1AQ71U36 451 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 HIST3H2AQ7L7L0 130 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 ABHD12BQ7Z5M8 362 aaPredicted RBP13□□□□□ -0.33
HDAC4-204ENST00000446876 PXKQ7Z7A4 578 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 P2RY8Q86VZ1 359 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 GPR137CQ8N3F9 429 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 AKAP1Q92667 903 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC4-204ENST00000446876 HIST1H2ACQ93077 130 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 HS6ST2Q96MM7 605 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 NELFAQ9H3P2 528 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 ESRP2Q9H6T0 727 aaKnown RBP13□□□□□ -0.33
HDAC4-204ENST00000446876 GPR35Q9HC97 309 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 NGBQ9NPG2 151 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 NDE1Q9NXR1 346 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 MAGEL2Q9UJ55 1249 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 RNF115Q9Y4L5 304 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 ENPP4Q9Y6X5 453 aa13□□□□□ -0.33
HDAC4-204ENST00000446876 PRRC2AP48634 2157 aaKnown RBP12.99□□□□□ -0.33
HDAC4-204ENST00000446876 OR6C65A6NJZ3 312 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 M0R1B8 84 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 F13BP05160 661 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 IFI30P13284 250 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 HOXC12P31275 282 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 IFNA8P32881 189 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 AQP2P41181 271 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 ARF1P84077 181 aaKnown RBP12.99□□□□□ -0.33
HDAC4-204ENST00000446876 VLDLRP98155 873 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 RPL18Q07020 188 aaKnown RBP12.99□□□□□ -0.33
HDAC4-204ENST00000446876 ZP4Q12836 540 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 TRAM2Q15035 370 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 ACKR1Q16570 336 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 CEACAM16Q2WEN9 425 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 TBRG1Q3YBR2 411 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 TBPL2Q6SJ96 375 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 SLC35D2Q76EJ3 337 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 LURAP1LQ8IV03 231 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 NRMQ8IXM6 262 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 C20orf196Q8IYI0 205 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 C17orf78Q8N4C9 275 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 PIK3C3Q8NEB9 887 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 ANKK1Q8NFD2 765 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 LILRB1Q8NHL6 650 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-204ENST00000446876 MOSPD2Q8NHP6 518 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 BCAS4Q8TDM0 211 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 GORASP2Q9H8Y8 452 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 CRLF2Q9HC73 371 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 NDUFAF4Q9P032 175 aa12.99□□□□□ -0.33
HDAC4-204ENST00000446876 SAMD4AQ9UPU9 718 aaKnown RBP12.99□□□□□ -0.33
HDAC4-204ENST00000446876 HEATR1Q9H583 2144 aaKnown RBP12.98□□□□□ -0.33
HDAC4-204ENST00000446876 ZNF726A6NNF4 738 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 ABCD4O14678 606 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 HS3ST1O14792 307 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 PDE5AO76074 875 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 MAKP20794 623 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 CALB2P22676 271 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 MNAT1P51948 309 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 DEFB113Q30KQ7 82 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 OR6N1Q8NGY5 312 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 BCL2L2Q92843 193 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-204ENST00000446876 BPIFA2Q96DR5 249 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 C7orf34Q96L11 122 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 NSMCE2Q96MF7 247 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 AMDHD2Q9Y303 409 aa12.98□□□□□ -0.33
HDAC4-204ENST00000446876 A0A087WUU8 490 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 SHISA9B4DS77 424 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 RPL36A-HNRNPH2H7BZ11 118 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 IGF2P01344 180 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 SEMG1P04279 462 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 ATP6V1B2P21281 511 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 GPR4P46093 362 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 CSNK1A1P48729 337 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms