RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 NR4A1P22736 598 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 MRPL19P49406 292 aaKnown RBP11.94□□□□□ -0.5
PTPRE-203ENST00000442830 DVL1P1P54792 670 aaPredicted RBP11.94□□□□□ -0.5
PTPRE-203ENST00000442830 TUBA1BP68363 451 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 TUBA4AP68366 448 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 LGALS3BPQ08380 585 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 NPRL3Q12980 569 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 RIN1Q13671 783 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 MPP2Q14168 576 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 GSG1Q2KHT4 349 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 TRMT5Q32P41 509 aaKnown RBP11.94□□□□□ -0.5
PTPRE-203ENST00000442830 MMEL1Q495T6 779 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 REEP3Q6NUK4 255 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 TUBA1AQ71U36 451 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 MDP1Q86V88 176 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 TMEM123Q8N131 208 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 SVOPLQ8N434 492 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 ZNF417Q8TAU3 575 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 MGARPQ8TDB4 240 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 GTF2H4Q92759 462 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 C1orf159Q96HA4 380 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 ZNF607Q96SK3 696 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 ZNF587Q96SQ5 575 aaPredicted RBP11.94□□□□□ -0.5
PTPRE-203ENST00000442830 TMEM27Q9HBJ8 222 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 NOX3Q9HBY0 568 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 TMEFF2Q9UIK5 374 aaPredicted RBP11.94□□□□□ -0.5
PTPRE-203ENST00000442830 GPR160Q9UJ42 338 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 POFUT2Q9Y2G5 429 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 CHST2Q9Y4C5 530 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 A0A1B0GWA3 101 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 B4DSR2 109 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 TRAF3IP2O43734 574 aaPredicted RBP11.93□□□□□ -0.5
PTPRE-203ENST00000442830 SERPINB7O75635 380 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 UBL3O95164 117 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 RAB36O95755 333 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 TFP02787 698 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 GRPRP30550 384 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 GLRXP35754 106 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 CDH15P55291 814 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 MRPS11P82912 194 aaKnown RBP11.93□□□□□ -0.5
PTPRE-203ENST00000442830 GALK2Q01415 458 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 GCNT6Q5T4J0 391 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 DPPA2Q7Z7J5 298 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 RANBP3LQ86VV4 465 aaPredicted RBP11.93□□□□□ -0.5
PTPRE-203ENST00000442830 C20orf196Q8IYI0 205 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 KDM8Q8N371 416 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 ZFAND2BQ8WV99 257 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 TAAR8Q969N4 342 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 MRPL24Q96A35 216 aaKnown RBP11.93□□□□□ -0.5
PTPRE-203ENST00000442830 SLC41A3Q96GZ6 507 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 PARD6BQ9BYG5 372 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 PAIP1Q9H074 479 aaKnown RBP11.93□□□□□ -0.5
PTPRE-203ENST00000442830 KLHL14Q9P2G3 628 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 RAB21Q9UL25 225 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 ZNF346Q9UL40 294 aaKnown RBP11.93□□□□□ -0.5
PTPRE-203ENST00000442830 GMEB1Q9Y692 573 aa11.93□□□□□ -0.5
PTPRE-203ENST00000442830 A0A087WUJ7 227 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 TMEM129A0AVI4 362 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 SLC22A23A1A5C7 686 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 ZNF726A6NNF4 738 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 LILRA1O75019 489 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 TGDSO95455 350 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 MT-ATP6P00846 226 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 ARAFP10398 606 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 WDR4P57081 412 aaKnown RBP11.92□□□□□ -0.5
PTPRE-203ENST00000442830 SELENOVP59797 346 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 PUDPQ08623 228 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 LRIF1Q5T3J3 769 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 GKAP1Q5VSY0 366 aaPredicted RBP11.92□□□□□ -0.5
PTPRE-203ENST00000442830 ZNF813Q6ZN06 617 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 DEF8Q6ZN54 512 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 IL17RELQ6ZVW7 336 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 PXKQ7Z7A4 578 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 GLCCI1Q86VQ1 547 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 VPS33AQ96AX1 596 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 TMEM43Q9BTV4 400 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 ULBP2Q9BZM5 246 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 C1orf198Q9H425 327 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 ZNF385DQ9H6B1 395 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 TMEM38AQ9H6F2 299 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 B3GNT2Q9NY97 397 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 MRPL39Q9NYK5 338 aaKnown RBP11.92□□□□□ -0.5
PTPRE-203ENST00000442830 SLC7A8Q9UHI5 535 aa11.92□□□□□ -0.5
PTPRE-203ENST00000442830 LRP5LA4QPB2 252 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 EVPLLA8MZ36 301 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 M0R3G1 203 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 POLR3GO15318 223 aaPredicted RBP11.91□□□□□ -0.5
PTPRE-203ENST00000442830 CELA3BP08861 270 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 ADRA2AP08913 450 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 CD79AP11912 226 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 ACHEP22303 614 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 SLC6A2P23975 617 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 RGS8P57771 180 aaPredicted RBP11.91□□□□□ -0.5
PTPRE-203ENST00000442830 CDK6Q00534 326 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 GTDC1Q4AE62 458 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 KRT80Q6KB66 452 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 PIWIL3Q7Z3Z3 882 aaKnown RBP11.91□□□□□ -0.5
PTPRE-203ENST00000442830 CDK20Q8IZL9 346 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 OR6N1Q8NGY5 312 aa11.91□□□□□ -0.5
PTPRE-203ENST00000442830 RDH5Q92781 318 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms