RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 OR6C74A6NCV1 312 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 PIN1P1O15428 100 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 LCMT2O60294 686 aaKnown RBP7.83□□□□□ -1.16
HPS4-206ENST00000439453 APOC1P02654 83 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 CDK2P24941 298 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 CD96P40200 585 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 MC3RP41968 323 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 MEOX2P50222 304 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 STPG1Q5TH74 334 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 UNQ9370/PRO34162Q6UXP9 181 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 WDR88Q6ZMY6 472 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 MUC20Q8N307 709 aaPredicted RBP7.83□□□□□ -1.16
HPS4-206ENST00000439453 ARL14Q8N4G2 192 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 OR13C2Q8NGS9 318 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 PDCD1LG2Q9BQ51 273 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 ZNF768Q9H5H4 540 aaKnown RBP7.83□□□□□ -1.16
HPS4-206ENST00000439453 RXFP3Q9NSD7 469 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 HAO2Q9NYQ3 351 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 SDK1Q7Z5N4 2213 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 GVINP1Q7Z2Y8 2422 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 A0A1B0GTQ1 180 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 LATO43561 262 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 ZNF254O75437 659 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 ATG12O94817 140 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 RASGRP1O95267 797 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 MGMTP16455 207 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 ACHEP22303 614 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 EDNRAP25101 427 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 RAB13P51153 203 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 CLDN2P57739 230 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 RPS15P62841 145 aaKnown RBP7.83□□□□□ -1.16
HPS4-206ENST00000439453 RBMS2Q15434 407 aaKnown RBP7.83□□□□□ -1.16
HPS4-206ENST00000439453 LTB4RQ15722 352 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 RPE65Q16518 533 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 PWWP2BQ6NUJ5 590 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 ZNF836Q6ZNA1 936 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 MOB3CQ70IA8 216 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 RAB11FIP2Q7L804 512 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 ZNF547Q8IVP9 402 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 CADM4Q8NFZ8 388 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 LOXL4Q96JB6 756 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 GPR174Q9BXC1 333 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 AICDAQ9GZX7 198 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 DPEP2Q9H4A9 486 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 CCDC86Q9H6F5 360 aaKnown RBP7.83□□□□□ -1.16
HPS4-206ENST00000439453 A0A1W2PR48 441 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 PQLC2LA1A4F0 135 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 PATE3B3GLJ2 98 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 K7ESM1 405 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 STATHP02808 62 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 RAB40ALP0C0E4 278 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 ZNF3P17036 446 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 ADH7P40394 386 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 STARP49675 285 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 POU4F2Q12837 409 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 STX4Q12846 297 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 MPPED2Q15777 294 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 CCDC157Q569K6 752 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 RPL22L1Q6P5R6 122 aaKnown RBP7.83□□□□□ -1.16
HPS4-206ENST00000439453 TMEM88Q6PEY1 159 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 NRSN1Q8IZ57 195 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 OR4C6Q8NH72 309 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 TNFAIP8L1Q8WVP5 186 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 TMEM239Q8WW34 195 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 RAB40AQ8WXH6 277 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 SLC35A4Q96G79 324 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 SPACA7Q96KW9 195 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 TMEM138Q9NPI0 162 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 BIN3Q9NQY0 253 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 CTSFQ9UBX1 484 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 OR5V1Q9UGF6 321 aa7.83□□□□□ -1.16
HPS4-206ENST00000439453 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.83□□□□□ -1.16
HPS4-206ENST00000439453 TRAPPC13A5PLN9 417 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 RFPL4AA6NLU0 287 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 METTL12A8MUP2 240 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 DISC1C4P0D8 188 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 RFPL4AL1F8VTS6 287 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 EIF4E2O60573 245 aaKnown RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 CSNK2A2P19784 350 aaPredicted RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 CNR1P21554 472 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ZNF136P52737 540 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 TAS2R20P59543 309 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 SLC9A5Q14940 896 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 RPL13AP3Q6NVV1 102 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 HAGHLQ6PII5 290 aaPredicted RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 FRRS1Q6ZNA5 592 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 DCUN1D3Q8IWE4 304 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 TMEM185AQ8NFB2 350 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 HAVCR1Q96D42 359 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 HSPA12BQ96MM6 686 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 TSNAXQ99598 290 aaKnown RBP7.82□□□□□ -1.16
HPS4-206ENST00000439453 OR52A5Q9H2C5 316 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ARRDC1-AS1Q9H2J1 176 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 KLHL31Q9H511 634 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 GNG8Q9UK08 70 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ATG4BQ9Y4P1 393 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 V9GY05 133 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 TMEM272A0A1B0GTI8 110 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 ACOD1A6NK06 481 aa7.82□□□□□ -1.16
HPS4-206ENST00000439453 GPR31O00270 319 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms