RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PARPBPQ9NWS1 579 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 KLHL13Q9P2N7 655 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 GRHPRQ9UBQ7 328 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 NDRG4Q9ULP0 352 aaKnown RBP11.3□□□□□ -0.6
SCLT1-202ENST00000439369 FLVCR1Q9Y5Y0 555 aa11.3□□□□□ -0.6
SCLT1-202ENST00000439369 CACNA1BQ00975 2339 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 ATMQ13315 3056 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 IGHV3-15A0A0B4J1V0 119 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 LOC100130705A0A1B0GUX0 176 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 OR6C65A6NJZ3 312 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 E9PLN8 166 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 C11orf98E9PRG8 122 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 M0R3G1 203 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 RAMP1O60894 148 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 AQP8O94778 261 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 BCL10O95999 233 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 IFNGP01579 166 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 F13BP05160 661 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 YES1P07947 543 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 IGFBP1P08833 259 aaPredicted RBP11.29□□□□□ -0.6
SCLT1-202ENST00000439369 NR2C1P13056 603 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 KLK2P20151 261 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 GGT2P36268 569 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 CA7P43166 264 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 CDC42P60953 191 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 GUSBP1Q15486 140 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 ACKR1Q16570 336 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 ZIK1Q3SY52 487 aaPredicted RBP11.29□□□□□ -0.6
SCLT1-202ENST00000439369 ARMC4Q5T2S8 1044 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 RTL6Q6ICC9 239 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 TMEM211Q6ICI0 200 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 CASP12Q6UXS9 341 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 SLC35D2Q76EJ3 337 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 DEPDC4Q8N2C3 294 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 OR6X1Q8NH79 312 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF519Q8TB69 540 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 FNDC8Q8TC99 324 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 ABHD3Q8WU67 409 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 TRUB1Q8WWH5 349 aaKnown RBP11.29□□□□□ -0.6
SCLT1-202ENST00000439369 TFAP2CQ92754 450 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 BBC3Q96PG8 261 aaPredicted RBP11.29□□□□□ -0.6
SCLT1-202ENST00000439369 ERMAPQ96PL5 475 aaPredicted RBP11.29□□□□□ -0.6
SCLT1-202ENST00000439369 VKORC1Q9BQB6 163 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 Q9H521 79 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 CMC2Q9NRP2 79 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 KLHL21Q9UJP4 597 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 ING1Q9UK53 422 aaPredicted RBP11.29□□□□□ -0.6
SCLT1-202ENST00000439369 RAB26Q9ULW5 256 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 FAM215AQ9Y5M1 114 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 IER3IP1Q9Y5U9 82 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 HSPE1-MOB4S4R3N1 261 aa11.29□□□□□ -0.6
SCLT1-202ENST00000439369 KIAA1549Q9HCM3 1950 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 DNAJC13O75165 2243 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 RIIAD1A6NNX1 92 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 MPZL2O60487 215 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 PPP1R3DO95685 299 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 TGM6O95932 706 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 PLGP00747 810 aaPredicted RBP11.28□□□□□ -0.6
SCLT1-202ENST00000439369 STSP08842 583 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 IFNGR1P15260 489 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 EPHA2P29317 976 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 NOS3P29474 1203 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 CEACAM8P31997 349 aaPredicted RBP11.28□□□□□ -0.6
SCLT1-202ENST00000439369 POLR2IP36954 125 aaKnown RBP11.28□□□□□ -0.6
SCLT1-202ENST00000439369 ERVK-25P63136 954 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 MYBPC1Q00872 1141 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 CLEC12AQ5QGZ9 265 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 TMEM201Q5SNT2 666 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 RIPPLY2Q5TAB7 128 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 RPTNQ6XPR3 784 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 IGFN1Q86VF2 1251 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 LSRQ86X29 649 aaPredicted RBP11.28□□□□□ -0.6
SCLT1-202ENST00000439369 ZIC4Q8N9L1 334 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 SETD9Q8NE22 299 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 OR4Q3Q8NH05 313 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 ASB10Q8WXI3 467 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 INTS12Q96CB8 462 aaKnown RBP11.28□□□□□ -0.6
SCLT1-202ENST00000439369 SLC25A44Q96H78 314 aaPredicted RBP11.28□□□□□ -0.6
SCLT1-202ENST00000439369 LRR1Q96L50 414 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 TSPAN32Q96QS1 320 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 APOL4Q9BPW4 351 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 TTYH2Q9BSA4 534 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 ALG12Q9BV10 488 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 FN3KQ9H479 309 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 IL20RAQ9UHF4 553 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF346Q9UL40 294 aaKnown RBP11.28□□□□□ -0.6
SCLT1-202ENST00000439369 EMC9Q9Y3B6 208 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 ADAM18Q9Y3Q7 739 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 GMPPBQ9Y5P6 360 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 SPTA1P02549 2419 aa11.28□□□□□ -0.6
SCLT1-202ENST00000439369 MED12Q93074 2177 aa11.27□□□□□ -0.6
SCLT1-202ENST00000439369 ZNF726A6NNF4 738 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 XKRYO14609 159 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 SURF4O15260 269 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 IL2RAP01589 272 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 IGHG1P01857 330 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 HLA-DOBP13765 273 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 ACADSP16219 412 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF3P17036 446 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 AGTR1P30556 359 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms