RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 OR5M9Q8NGP3 310 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 FNDC9Q8TBE3 224 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 MUS81Q96NY9 551 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 TSPAN32Q96QS1 320 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 CMC2Q9NRP2 79 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 PNPLA3Q9NST1 481 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 KLHL9Q9P2J3 617 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 MGAQ8IWI9 3026 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 TEX13CA0A0J9YWL9 993 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 A6NIZ1 184 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 SURF4O15260 269 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 TRAF3IP2O43734 574 aaPredicted RBP18.46■□□□□ 0.55
CHD3-204ENST00000439235 AKAP8O43823 692 aaKnown RBP18.46■□□□□ 0.55
CHD3-204ENST00000439235 BCL10O95999 233 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 GNAO1P09471 354 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 HLA-DOBP13765 273 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 ZNF3P17036 446 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 SLC16A1P53985 500 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 RAP1BP61224 184 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 RAP1AP62834 184 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 IL5RAQ01344 420 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 RASGEF1BQ0VAM2 473 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 KRR1Q13601 381 aaKnown RBP18.46■□□□□ 0.55
CHD3-204ENST00000439235 SLC35F1Q5T1Q4 408 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 ZNF585AQ6P3V2 769 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 ADGRE4PQ86SQ3 457 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 JAZF1Q86VZ6 243 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 TRUB1Q8WWH5 349 aaKnown RBP18.46■□□□□ 0.55
CHD3-204ENST00000439235 CNBD2Q96M20 576 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 Q96M85 177 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 TRIB1Q96RU8 372 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 EMC3Q9P0I2 261 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 CLCF1Q9UBD9 225 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 ZNF346Q9UL40 294 aaKnown RBP18.46■□□□□ 0.55
CHD3-204ENST00000439235 FREM3P0C091 2139 aa18.46■□□□□ 0.55
CHD3-204ENST00000439235 ZNF716A6NP11 495 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 XKRYO14609 159 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 GPR171O14626 319 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 IFNGR1P15260 489 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 MED21Q13503 144 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 ACSF3Q4G176 576 aaPredicted RBP18.45■□□□□ 0.54
CHD3-204ENST00000439235 EEF1A1P5Q5VTE0 462 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 KRT80Q6KB66 452 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 PTCHD4Q6ZW05 846 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 CREB3L2Q70SY1 520 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 THAP5Q7Z6K1 395 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 ADCK1Q86TW2 530 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 CD163Q86VB7 1156 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 CCDC71Q8IV32 467 aaPredicted RBP18.45■□□□□ 0.54
CHD3-204ENST00000439235 ARIH2OSQ8N7S6 290 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 OR8J1Q8NGP2 316 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 ZNF519Q8TB69 540 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 CPT1CQ8TCG5 803 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 ABHD3Q8WU67 409 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 RASD2Q96D21 266 aa18.45■□□□□ 0.54
CHD3-204ENST00000439235 ADAD1Q96M93 576 aaKnown RBP18.45■□□□□ 0.54
CHD3-204ENST00000439235 IGKV3D-15A0A087WSY6 115 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 M0R3G1 203 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 PRRG2O14669 202 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 ZNHIT1O43257 154 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 AQP8O94778 261 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 HOXD4P09016 255 aaPredicted RBP18.44■□□□□ 0.54
CHD3-204ENST00000439235 HIST1H1CP16403 213 aaKnown RBP18.44■□□□□ 0.54
CHD3-204ENST00000439235 ACVR1BP36896 505 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 MLLT10P55197 1068 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.44■□□□□ 0.54
CHD3-204ENST00000439235 MELKQ14680 651 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 ARMC4Q5T2S8 1044 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 ENTHD1Q8IYW4 607 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 TCEANCQ8N8B7 351 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 OR52E2Q8NGJ4 325 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 TMEM163Q8TC26 289 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 ASB10Q8WXI3 467 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 FN3KQ9H479 309 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 RNF122Q9H9V4 155 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 CALHM2Q9HA72 323 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 GP6Q9HCN6 339 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 MED29Q9NX70 200 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 RNF6Q9Y252 685 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 LRCH1Q9Y2L9 728 aa18.44■□□□□ 0.54
CHD3-204ENST00000439235 CD8B2A6NJW9 211 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 M0R129 80 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 PRKYO43930 277 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 PAICSP22234 425 aaKnown RBP18.43■□□□□ 0.54
CHD3-204ENST00000439235 BIDP55957 195 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 CLDN17P56750 224 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 SNRPGP62308 76 aaKnown RBP18.43■□□□□ 0.54
CHD3-204ENST00000439235 MESTQ5EB52 335 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 NSUN5P2Q63ZY6 315 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 NHLRC1Q6VVB1 395 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 MARVELD2Q8N4S9 558 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 ST6GALNAC3Q8NDV1 305 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 OR4K13Q8NH42 304 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 OR6X1Q8NH79 312 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 WNT2BQ93097 391 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 SNX18Q96RF0 628 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 GLRX2Q9NS18 164 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 RCE1Q9Y256 329 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 FLVCR1Q9Y5Y0 555 aa18.43■□□□□ 0.54
CHD3-204ENST00000439235 ZNF726A6NNF4 738 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms