RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PALMDQ9NP74 551 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 PAK1IP1Q9NWT1 392 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 EHFQ9NZC4 300 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 DEC1Q9P2X7 70 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 CRLS1Q9UJA2 301 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 KLHL21Q9UJP4 597 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 MOKQ9UQ07 419 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 EIF3LQ9Y262 564 aaKnown RBP2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 L3MBTL1Q9Y468 752 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 MFHAS1Q9Y4C4 1052 aa2.37□□□□□ -2.03
HMGB3P12-201ENST00000438745 MYLKQ15746 1914 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 IGLV8-61A0A075B6I0 122 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 IGKV6D-21A0A0A0MT36 114 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 A0A1B0GUH1 482 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR6C65A6NJZ3 312 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 SLC9A3R1O14745 358 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 RAMP1O60894 148 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 SCRG1O75711 98 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 LY6G6DO95868 133 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR4Q2P0C623 313 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 TCN2P20062 427 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 NMT1P30419 496 aaKnown RBP2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 UGT1A3P35503 534 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 BDKRB1P46663 353 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 P2RY4P51582 365 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 RPL32P62910 135 aaKnown RBP2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 VLDLRP98155 873 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 DEFA6Q01524 100 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 BDH1Q02338 343 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 BCL2L1Q07817 233 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF630Q2M218 657 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 TTC31Q49AM3 519 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 LINC01620Q4KN68 170 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 PAGE2BQ5JRK9 111 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 FAM120AOSQ5T036 256 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 WSCD1Q658N2 575 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 LRRC8BQ6P9F7 803 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 CBLN3Q6UW01 205 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 DPY19L4Q7Z388 723 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF573Q86YE8 665 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 GRAMD2AQ8IUY3 354 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 UBQLNLQ8IYU4 475 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 CENPLQ8N0S6 344 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 Q8N7P7 452 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR5AU1Q8NGC0 362 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR13F1Q8NGS4 319 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR9A4Q8NGU2 314 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 FAF2Q96CS3 445 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 C19orf60Q96EN9 201 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 VPS39Q96JC1 886 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 AKR1E2Q96JD6 320 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 SECISBP2Q96T21 854 aaKnown RBP2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 YTHDF1Q9BYJ9 559 aaKnown RBP2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 BOLA2Q9H3K6 86 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 WDR76Q9H967 626 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 COG4Q9H9E3 785 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 POLE3Q9NRF9 147 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 IL17CQ9P0M4 197 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 B9D1Q9UPM9 204 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 FLVCR1Q9Y5Y0 555 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 UBIAD1Q9Y5Z9 338 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 U3KQV3 271 aa2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 MYO5AQ9Y4I1 1855 aaKnown RBP2.36□□□□□ -2.03
HMGB3P12-201ENST00000438745 NBEAL2Q6ZNJ1 2754 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 BSNQ9UPA5 3926 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 RAI1Q7Z5J4 1906 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 PLXND1Q9Y4D7 1925 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 ACANP16112 2415 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 FAM220BPB1ANY3 271 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 RTL8CO15255 209 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 CLDN3O15551 220 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 DPM1O60762 260 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 TRIM3O75382 744 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 TM7SF2O76062 418 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 CCNE2O96020 404 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 CD55P08174 381 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 HBQ1P09105 142 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 P0C879 139 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 EPB41P11171 864 aaKnown RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 BCKDHAP12694 445 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 PRG2P13727 222 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 VDAC1P21796 283 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 MDH1P40925 334 aaKnown RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 TUFMP49411 452 aaKnown RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 RND3P61587 244 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 OVGP1Q12889 678 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 ITGB3BPQ13352 177 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 DPYSL3Q14195 570 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 KIAA0040Q15053 153 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 TMEM41BQ5BJD5 291 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 C9orf129Q5T035 196 aaKnown RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 ATF7IP2Q5U623 682 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 RSBN1Q5VWQ0 802 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 ACSM5Q6NUN0 579 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 GUSBP11Q6P575 273 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 BLOC1S2Q6QNY1 142 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 MOB1BQ7L9L4 216 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 KIAA1328Q86T90 577 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 CDR2LQ86X02 465 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 IQCKQ8N0W5 287 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms