RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 AKR7A2O43488 359 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 CDC40O60508 579 aaKnown RBP eCLIP8.62□□□□□ -1.03
CUX1-206ENST00000437600 PRAMEF2O60811 474 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 FZD7O75084 574 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ICOSLGO75144 302 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 SIRPAP78324 504 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 SF3A2Q15428 464 aaKnown RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 ARHGAP40Q5TG30 622 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 KRT77Q7Z794 578 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 CCDC28AQ8IWP9 274 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ZNF595Q8IYB9 648 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 YIPF7Q8N8F6 280 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 MAP6Q96JE9 813 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 TMEM43Q9BTV4 400 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 LMF2Q9BU23 707 aaKnown RBP8.62□□□□□ -1.03
CUX1-206ENST00000437600 ZNF426Q9BUY5 554 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 KCNN2Q9H2S1 579 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 WDR76Q9H967 626 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 ISYNA1Q9NPH2 558 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 KLHDC2Q9Y2U9 406 aa8.62□□□□□ -1.03
CUX1-206ENST00000437600 A0A1W2PQM1 296 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 SPI1P17947 270 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 TACR3P29371 465 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 MPLP40238 635 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 CCR6P51684 374 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 SKP1P63208 163 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 MRPL28Q13084 256 aaKnown RBP8.61□□□□□ -1.03
CUX1-206ENST00000437600 GPR176Q14439 515 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 TCTE1Q5JU00 501 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 LINC00114Q6XXX2 140 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 SLC35F2Q8IXU6 374 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 GRPEL2Q8TAA5 225 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 SLC7A6Q92536 515 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 DACT3Q96B18 629 aaPredicted RBP8.61□□□□□ -1.03
CUX1-206ENST00000437600 SOSTQ9BQB4 213 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 NOX4Q9NPH5 578 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 LANCL2Q9NS86 450 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 MCUBQ9NWR8 336 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 FBXO4Q9UKT5 387 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 A0A0G2JK05 382 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 NPIPB9F8W1W9 429 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 IFNGP01579 166 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 CLPSP04118 112 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 FBXO45P0C2W1 286 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 CTRB1P17538 263 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 RAB3BP20337 219 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 EPHA8P29322 1005 aaPredicted RBP8.61□□□□□ -1.03
CUX1-206ENST00000437600 EVI2BP34910 448 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 HAAOP46952 286 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 SLC37A1P57057 533 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 RPS11P62280 158 aaKnown RBP eCLIP8.61□□□□□ -1.036e-6■■■■■ 44.3
CUX1-206ENST00000437600 DGCR2P98153 550 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 ETFDHQ16134 617 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 BCL2L15Q5TBC7 163 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 CTRB2Q6GPI1 263 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 MZT2AQ6P582 158 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 LRRC69Q6ZNQ3 347 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 SLC35D2Q76EJ3 337 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 DPY19L4Q7Z388 723 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 OR10AC1Q8NH08 325 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 ZNF671Q8TAW3 534 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 SETD6Q8TBK2 473 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 GPR119Q8TDV5 335 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 TAAR8Q969N4 342 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 DHRS9Q9BPW9 319 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 SLA2Q9H6Q3 261 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 APMAPQ9HDC9 416 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 RBFOX1Q9NWB1 397 aaKnown RBP8.61□□□□□ -1.03
CUX1-206ENST00000437600 GTF2A1LQ9UNN4 478 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 TMEM5Q9Y2B1 443 aa8.61□□□□□ -1.03
CUX1-206ENST00000437600 MN1Q10571 1320 aaPredicted RBP8.61□□□□□ -1.03
CUX1-206ENST00000437600 FREM3P0C091 2139 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 PIN1P1O15428 100 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ARHGEF9O43307 516 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 FMO6PO60774 539 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ZFPL1O95159 310 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 UTS2O95399 124 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ANKRD34CP0C6C1 535 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 NAGAP17050 411 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 F8A1P23610 371 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 CLDN6P56747 220 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 FUT7Q11130 342 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 KLHL26Q53HC5 615 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 HBMQ6B0K9 141 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 DMKNQ6E0U4 476 aaPredicted RBP8.6□□□□□ -1.03
CUX1-206ENST00000437600 SFRP4Q6FHJ7 346 aaPredicted RBP8.6□□□□□ -1.03
CUX1-206ENST00000437600 FAAP20Q6NZ36 180 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 METAP1DQ6UB28 335 aaPredicted RBP8.6□□□□□ -1.03
CUX1-206ENST00000437600 ZNF550Q7Z398 422 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 FAM181AQ8N9Y4 354 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 OR51A4Q8NGJ6 313 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 SAP25Q8TEE9 199 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 THEM6Q8WUY1 208 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 MS4A3Q96HJ5 214 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ZNF285Q96NJ3 590 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 LPAR4Q99677 370 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 G6PC3Q9BUM1 346 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ALG12Q9BV10 488 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 NUDT9Q9BW91 350 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 OR11A1Q9GZK7 315 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms