RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 OR14I1A6ND48 311 aa20.54■□□□□ 0.88
CPSF4-204ENST00000436336 ZNF43P17038 809 aa20.54■□□□□ 0.88
CPSF4-204ENST00000436336 KLRB1Q12918 225 aa20.54■□□□□ 0.88
CPSF4-204ENST00000436336 KRR1Q13601 381 aaKnown RBP20.54■□□□□ 0.88
CPSF4-204ENST00000436336 C3AR1Q16581 482 aa20.54■□□□□ 0.88
CPSF4-204ENST00000436336 KRTCAP3Q53RY4 240 aa20.54■□□□□ 0.88
CPSF4-204ENST00000436336 NHLRC1Q6VVB1 395 aa20.54■□□□□ 0.88
CPSF4-204ENST00000436336 SLC35D2Q76EJ3 337 aa20.54■□□□□ 0.88
CPSF4-204ENST00000436336 PM20D2Q8IYS1 436 aa20.54■□□□□ 0.88
CPSF4-204ENST00000436336 LRR1Q96L50 414 aa20.54■□□□□ 0.88
CPSF4-204ENST00000436336 MCTS1Q9ULC4 181 aaKnown RBP20.54■□□□□ 0.88
CPSF4-204ENST00000436336 ERVH48-1M5A8F1 160 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 SYNGR4O95473 234 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 BCL10O95999 233 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 IFNGR1P15260 489 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 C1DQ13901 141 aaKnown RBP20.53■□□□□ 0.88
CPSF4-204ENST00000436336 CRMP1Q14194 572 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 MESTQ5EB52 335 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 ABLIM2Q6H8Q1 611 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 JAZF1Q86VZ6 243 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 GHDCQ8N2G8 530 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 SLC37A3Q8NCC5 494 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 SDR9C7Q8NEX9 313 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 ZNF519Q8TB69 540 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 ROBO4Q8WZ75 1007 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 YTHDF1Q9BYJ9 559 aaKnown RBP20.53■□□□□ 0.88
CPSF4-204ENST00000436336 HINT3Q9NQE9 182 aaKnown RBP20.53■□□□□ 0.88
CPSF4-204ENST00000436336 KLHL13Q9P2N7 655 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 SH3D21A4FU49 640 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 PRR23D1E9PI22 279 aaPredicted RBP20.53■□□□□ 0.88
CPSF4-204ENST00000436336 TRAF3IP2O43734 574 aaPredicted RBP20.53■□□□□ 0.88
CPSF4-204ENST00000436336 CYTIPO60759 359 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 PRR23D2P0DMB1 279 aaPredicted RBP20.53■□□□□ 0.88
CPSF4-204ENST00000436336 PAICSP22234 425 aaKnown RBP20.53■□□□□ 0.88
CPSF4-204ENST00000436336 FMO3P31513 532 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 ACVR1BP36896 505 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 ITGADQ13349 1161 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 SLC17A1Q14916 467 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 RBM48Q5RL73 367 aaKnown RBP20.53■□□□□ 0.88
CPSF4-204ENST00000436336 ARMC4Q5T2S8 1044 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 FAM205BPQ63HN1 556 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 FCRLAQ7L513 359 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 CXXC5Q7LFL8 322 aaKnown RBP20.53■□□□□ 0.88
CPSF4-204ENST00000436336 CISD2Q8N5K1 135 aaKnown RBP20.53■□□□□ 0.88
CPSF4-204ENST00000436336 FAR1Q8WVX9 515 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 ASB10Q8WXI3 467 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 ZNF566Q969W8 418 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 MYRFQ9Y2G1 1151 aa20.53■□□□□ 0.88
CPSF4-204ENST00000436336 GTF3C1Q12789 2109 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 A6NIZ1 184 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 KDM4EB2RXH2 506 aaPredicted RBP20.52■□□□□ 0.88
CPSF4-204ENST00000436336 NPIPA2E9PIF3 369 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 NPIPA3F8WFD2 350 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 XKRYO14609 159 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 ACVR2AP27037 513 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 RAP1BP61224 184 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 RAP1AP62834 184 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 CSNK2BP67870 215 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 MELKQ14680 651 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 PON3Q15166 354 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 SMN1Q16637 294 aaKnown RBP20.52■□□□□ 0.88
CPSF4-204ENST00000436336 NXNL2Q5VZ03 156 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 ADCK1Q86TW2 530 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 CPOQ8IVL8 374 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 NPEPL1Q8NDH3 523 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 NMNAT3Q96T66 252 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 DDOQ99489 341 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 MED29Q9NX70 200 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 DNAJC27Q9NZQ0 273 aa20.52■□□□□ 0.88
CPSF4-204ENST00000436336 BSNQ9UPA5 3926 aa20.52■□□□□ 0.87
CPSF4-204ENST00000436336 PIEZO2Q9H5I5 2752 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 SLC1A7O00341 560 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 ENTPD6O75354 484 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 TNFAIP8O95379 198 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 CCDC159P0C7I6 412 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 CDKN2AP42771 156 aaKnown RBP20.51■□□□□ 0.87
CPSF4-204ENST00000436336 AADACL4Q5VUY2 407 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 PLBD1Q6P4A8 553 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 LEG1Q6P5S2 330 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 CREB3L2Q70SY1 520 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 BPIFB6Q8NFQ5 453 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 OR9K2Q8NGE7 335 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 TXNDC15Q96J42 360 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 ZNF582Q96NG8 517 aaPredicted RBP20.51■□□□□ 0.87
CPSF4-204ENST00000436336 SNX18Q96RF0 628 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 TUBA1CQ9BQE3 449 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 PLCXD1Q9NUJ7 323 aa20.51■□□□□ 0.87
CPSF4-204ENST00000436336 FAM183AA6NL82 134 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 SNTNA6NMZ2 147 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 ZNF716A6NP11 495 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 M0R3G1 203 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 ARHGEF9O43307 516 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 RPSAP08865 295 aaKnown RBP20.5■□□□□ 0.87
CPSF4-204ENST00000436336 HDDC2Q7Z4H3 204 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 BCDIN3DQ7Z5W3 292 aaKnown RBP20.5■□□□□ 0.87
CPSF4-204ENST00000436336 CYB561A3Q8NBI2 242 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 ZPLD1Q8TCW7 415 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 RNF128Q8TEB7 428 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 H2AFY2Q9P0M6 372 aaPredicted RBP20.5■□□□□ 0.87
CPSF4-204ENST00000436336 ZZEF1O43149 2961 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms