RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 EXD3Q8N9H8 876 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 LRRC75AQ8NAA5 344 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 OR2T35Q8NGX2 323 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 OR5AK2Q8NH90 309 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 KTI12Q96EK9 354 aaPredicted RBP10.74□□□□□ -0.69
CD44-209ENST00000433892 LPAR4Q99677 370 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 LRRC61Q9BV99 259 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 CDCP1Q9H5V8 836 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 METTL17Q9H7H0 456 aaPredicted RBP10.74□□□□□ -0.69
CD44-209ENST00000433892 PLEKHA1Q9HB21 404 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 UBQLN4Q9NRR5 601 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 AKAP7Q9P0M2 348 aaPredicted RBP10.74□□□□□ -0.69
CD44-209ENST00000433892 EIF3KQ9UBQ5 218 aaKnown RBP10.74□□□□□ -0.69
CD44-209ENST00000433892 FOXJ3Q9UPW0 622 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 A8MUA0 341 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 MEN1O00255 615 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 KHNYNO15037 678 aaKnown RBP10.74□□□□□ -0.69
CD44-209ENST00000433892 CDK2P24941 298 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 MAOBP27338 520 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 SLC25A1P53007 311 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 ALKBH1Q13686 389 aaKnown RBP10.74□□□□□ -0.69
CD44-209ENST00000433892 GRM7Q14831 915 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 ODF4Q2M2E3 257 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 Q499Y3 187 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 ESCO2Q56NI9 601 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 SLC6A19Q695T7 634 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 ZNF440Q8IYI8 595 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 ELMOD2Q8IZ81 293 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 FAM71CQ8NEG0 241 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 DPCDQ9BVM2 203 aaPredicted RBP10.74□□□□□ -0.69
CD44-209ENST00000433892 ZNF436Q9C0F3 470 aaPredicted RBP10.74□□□□□ -0.69
CD44-209ENST00000433892 PTTG3PQ9NZH4 202 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 GRHPRQ9UBQ7 328 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 IKZF2Q9UKS7 526 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 MMP17Q9ULZ9 603 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 FKBP7Q9Y680 259 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 SCDO00767 359 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 ARPC1BO15143 372 aaKnown RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 GPANK1O95872 356 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 ECDO95905 644 aaPredicted RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 ASAH2BP0C7U1 165 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 TMIGD3P0DMS9 266 aaPredicted RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 HSD17B7P56937 341 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 RPL18Q07020 188 aaKnown RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 MESTQ5EB52 335 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 FNDC7Q5VTL7 733 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 OTPQ5XKR4 325 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 KIAA0895LQ68EN5 471 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 NLRC3Q7RTR2 1065 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 KANSL1Q7Z3B3 1105 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 OR6V1Q8N148 313 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 TCTN2Q96GX1 697 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 ZNF578Q96N58 590 aaPredicted RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 SORCS2Q96PQ0 1159 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 ELF4Q99607 663 aaPredicted RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 CHIAQ9BZP6 476 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 SLITRK2Q9H156 845 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 NXF5Q9H1B4 397 aaKnown RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 WDR76Q9H967 626 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 PNO1Q9NRX1 252 aaKnown RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 PRODH2Q9UF12 536 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 LAMP5Q9UJQ1 280 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 SCP2D1Q9UJQ7 156 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 G3V3Q6 166 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 ZNF264O43296 627 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 UTS2O95399 124 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 MPC2O95563 127 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 MAS1P04201 325 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 DCTDP32321 178 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 RAD52P43351 418 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 P2RX1P51575 399 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 ART1P52961 327 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 AP3S2P59780 193 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 PLA2G7Q13093 441 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 COL28A1Q2UY09 1125 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 FAM209AQ5JX71 171 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 SLC25A25Q6KCM7 469 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 POMZP3Q6PJE2 187 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 DPY19L4Q7Z388 723 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 KCTD20Q7Z5Y7 419 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 TMPRSS12Q86WS5 348 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 PRR22Q8IZ63 422 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 OR51A4Q8NGJ6 313 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 OR6N2Q8NGY6 317 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 OR2T4Q8NH00 348 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 OR10AC1Q8NH08 325 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 OR8K3Q8NH51 312 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 ZNF563Q8TA94 476 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 CEP76Q8TAP6 659 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 PTPMT1Q8WUK0 201 aaPredicted RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 PCNPQ8WW12 178 aaKnown RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 TTC9Q92623 222 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 NXPE2Q96DL1 559 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 TSPAN32Q96QS1 320 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 SEC22CQ9BRL7 303 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 NOX3Q9HBY0 568 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 ZNF275Q9NSD4 429 aaPredicted RBP10.73□□□□□ -0.69
CD44-209ENST00000433892 SOHLH2Q9NX45 425 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 TAS2R10Q9NYW0 307 aa10.73□□□□□ -0.69
CD44-209ENST00000433892 ING1Q9UK53 422 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms