RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ARL5BQ96KC2 179 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 WDFY2Q96P53 400 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 KCNN2Q9H2S1 579 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 ABCB9Q9NP78 766 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 SDK2Q58EX2 2172 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 ALPK2Q86TB3 2170 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 IGLV3-32A0A0A0MS00 114 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 A0A1W2PRG6 482 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 OR2T1O43869 369 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 OR6A2O95222 327 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 TCEA1P23193 301 aaKnown RBP17.65■□□□□ 0.42
VRK2-205ENST00000432057 CASP3P42574 277 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 GBX2P52951 348 aaPredicted RBP17.65■□□□□ 0.42
VRK2-205ENST00000432057 RPL27P61353 136 aaKnown RBP17.65■□□□□ 0.42
VRK2-205ENST00000432057 PLPPR5Q32ZL2 321 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 SLC16A9Q7RTY1 509 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 OR11G2Q8NGC1 345 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 OR13C5Q8NGS8 318 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 ZNF519Q8TB69 540 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 RNF32Q9H0A6 362 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 PPIL3Q9H2H8 161 aaKnown RBP17.65■□□□□ 0.42
VRK2-205ENST00000432057 SDHAF3Q9NRP4 125 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 WDR70Q9NW82 654 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 KLHDC2Q9Y2U9 406 aa17.65■□□□□ 0.42
VRK2-205ENST00000432057 LOC110117498-PIK3R3F6TDL0 507 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 MASP2O00187 686 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 PSMD9O00233 223 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 XKRYO14609 159 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 CDX4O14627 284 aaPredicted RBP17.64■□□□□ 0.41
VRK2-205ENST00000432057 MSX1P28360 303 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 PSMB10P40306 273 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 RAB15P59190 212 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 RPS18P62269 152 aaKnown RBP17.64■□□□□ 0.41
VRK2-205ENST00000432057 DNASE1L3Q13609 305 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 CDK5R1Q15078 307 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 TRAM1Q15629 374 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 FAM27D1Q5T7N8 215 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 EEF1A1P5Q5VTE0 462 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 STEAP3Q658P3 488 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 PLEKHG7Q6ZR37 379 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 NAXDQ8IW45 347 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 TIGD4Q8IY51 512 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 ABHD4Q8TB40 342 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 SDHCQ99643 169 aaPredicted RBP17.64■□□□□ 0.41
VRK2-205ENST00000432057 STRADBQ9C0K7 418 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 TXNIPQ9H3M7 391 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 MRPL39Q9NYK5 338 aaKnown RBP17.64■□□□□ 0.41
VRK2-205ENST00000432057 PISDQ9UG56 409 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 V9GYH0 126 aa17.64■□□□□ 0.41
VRK2-205ENST00000432057 ETV2O00321 342 aaPredicted RBP17.63■□□□□ 0.41
VRK2-205ENST00000432057 OGG1O15527 345 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 PFDN1O60925 122 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 SNX4O95219 450 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 GPANK1O95872 356 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 TGM1P22735 817 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 F8A1P23610 371 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 GDI2P50395 445 aaKnown RBP17.63■□□□□ 0.41
VRK2-205ENST00000432057 HSF2Q03933 536 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 MELKQ14680 651 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 OR7A5Q15622 319 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 PRAMEF20Q5VT98 475 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 IL20RBQ6UXL0 311 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 RAB11FIP2Q7L804 512 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 OR2M3Q8NG83 312 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 POC1BQ8TC44 478 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 M1APQ8TC57 530 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 AP3S1Q92572 193 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 GHSRQ92847 366 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 MRPL48Q96GC5 212 aaKnown RBP17.63■□□□□ 0.41
VRK2-205ENST00000432057 ZNF160Q9HCG1 818 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 FBXL2Q9UKC9 423 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 CHCHD2Q9Y6H1 151 aaPredicted RBP17.63■□□□□ 0.41
VRK2-205ENST00000432057 PCSK5Q92824 1860 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 NSG1A0A0A6YYJ2 146 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 H3BML4 177 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 IGHMP01871 453 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 SHC1P29353 583 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 MTNR1BP49286 362 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 INSM1Q01101 510 aaPredicted RBP17.63■□□□□ 0.41
VRK2-205ENST00000432057 CEACAM19Q7Z692 300 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 SLC22A16Q86VW1 577 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 KDM8Q8N371 416 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 OR6S1Q8NH40 331 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 DDIT4LQ96D03 193 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 SMIM19Q96E16 107 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 ATF6BQ99941 703 aa17.63■□□□□ 0.41
VRK2-205ENST00000432057 TP53I11O14683 189 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 ZNF208O43345 1280 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 EFNA2O43921 213 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 SC5DO75845 299 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 AKR7A3O95154 331 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 TFPIP10646 304 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 IMPDH2P12268 514 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 HLA-DOBP13765 273 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 EDNRAP25101 427 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 SIRPAP78324 504 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 SLC25A53Q5H9E4 307 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 ZMAT1Q5H9K5 638 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 DDI2Q5TDH0 399 aa17.62■□□□□ 0.41
VRK2-205ENST00000432057 TIPARPQ7Z3E1 657 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms