RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 HOXB1P14653 301 aaPredicted RBP14.81□□□□□ -0.04
TRIM39-209ENST00000428728 CBR1P16152 277 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 GPX2P18283 190 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 NR4A2P43354 598 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 ATP4BP51164 291 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 HGFACQ04756 655 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 EFNB3Q15768 340 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 TTMPQ5BVD1 217 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 NET1Q7Z628 596 aaPredicted RBP14.81□□□□□ -0.04
TRIM39-209ENST00000428728 RANBP3LQ86VV4 465 aaPredicted RBP14.81□□□□□ -0.04
TRIM39-209ENST00000428728 SVOPLQ8N434 492 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 FAM169BQ8N8A8 192 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 SMYD1Q8NB12 490 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 ANKK1Q8NFD2 765 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 ATP6V1G3Q96LB4 118 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 BEX2Q9BXY8 128 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 PLK3Q9H4B4 646 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 CHODLQ9H9P2 273 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 MED29Q9NX70 200 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 CORINQ9Y5Q5 1042 aa14.81□□□□□ -0.04
TRIM39-209ENST00000428728 COL6A5A8TX70 2615 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 MS4A18H0YCH9 400 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 NDUFS8O00217 210 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 TPST2O60704 377 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 SERPINB7O75635 380 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 APEHP13798 732 aaKnown RBP14.8□□□□□ -0.04
TRIM39-209ENST00000428728 THBS4P35443 961 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 GZMKP49863 264 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 PPOXP50336 477 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 CDH12P55289 794 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 PMS2P3Q13401 168 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 SNTB2Q13425 540 aaKnown RBP14.8□□□□□ -0.04
TRIM39-209ENST00000428728 MFSD13AQ14CX5 517 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 ADRM1Q16186 407 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 CYP51A1Q16850 503 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 MS4A18Q3C1V0 323 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 IQCCQ4KMZ1 466 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 KRT80Q6KB66 452 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 SPATA21Q7Z572 469 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 DHDDSQ86SQ9 333 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 PHC2Q8IXK0 858 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 ARIH2OSQ8N7S6 290 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 NUP37Q8NFH4 326 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 BHLHE22Q8NFJ8 381 aaPredicted RBP14.8□□□□□ -0.04
TRIM39-209ENST00000428728 FOXN4Q96NZ1 517 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 SHARPINQ9H0F6 387 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 ZNF442Q9H7R0 627 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 NOX3Q9HBY0 568 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 USP22Q9UPT9 525 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 GMEB1Q9Y692 573 aa14.8□□□□□ -0.04
TRIM39-209ENST00000428728 IGHV4-61A0A0C4DH41 118 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 LOC102725191A0A1B0GVB3 256 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 LOC390937A0A1W2PQ73 354 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 SLC35F4A4IF30 521 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 LMX1BO60663 402 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 MFN2O95140 757 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 HLA-HP01893 362 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 NPR2P20594 1047 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 IGFBP5P24593 272 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 ARR3P36575 388 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 MTPNP58546 118 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 PUDPQ08623 228 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 CAMK2DQ13557 499 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 SELPLGQ14242 412 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 FAM166AQ6J272 317 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 DLEU7Q6UYE1 221 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 ZNF813Q6ZN06 617 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 IL17RELQ6ZVW7 336 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 PTOV1Q86YD1 416 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 WDFY1Q8IWB7 410 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 C20orf196Q8IYI0 205 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 ZCCHC24Q8N2G6 241 aaKnown RBP14.79□□□□□ -0.04
TRIM39-209ENST00000428728 SCAIQ8N9R8 606 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 C11orf65Q8NCR3 313 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 SLC41A3Q96GZ6 507 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 TXNDC15Q96J42 360 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 MCHR1Q99705 422 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 ULBP2Q9BZM5 246 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 BPESC1Q9GZL8 116 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 RAB1BQ9H0U4 201 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 DYNLRB1Q9NP97 96 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 MYOZ1Q9NP98 299 aaPredicted RBP14.79□□□□□ -0.04
TRIM39-209ENST00000428728 B3GAT2Q9NPZ5 323 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 TMEM160Q9NX00 188 aa14.79□□□□□ -0.04
TRIM39-209ENST00000428728 MRPL39Q9NYK5 338 aaKnown RBP14.79□□□□□ -0.04
TRIM39-209ENST00000428728 LEF1Q9UJU2 399 aaPredicted RBP14.79□□□□□ -0.04
TRIM39-209ENST00000428728 LOC100289279A0A1B0GTE1 492 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 SH3PXD2BA1X283 911 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 C11orf98E9PRG8 122 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 PHF1O43189 567 aaPredicted RBP14.78□□□□□ -0.04
TRIM39-209ENST00000428728 CD79AP11912 226 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 B4GALT1P15291 398 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 AHCYP23526 432 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 DAG1Q14118 895 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 RUNDC3AQ59EK9 446 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 CDK20Q8IZL9 346 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 OR6N1Q8NGY5 312 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 OR6S1Q8NH40 331 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 VANGL1Q8TAA9 524 aaPredicted RBP14.78□□□□□ -0.04
TRIM39-209ENST00000428728 MS4A3Q96HJ5 214 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms