RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 RAB4AP20338 218 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 GMPRP36959 345 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 TRA2AQ13595 282 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 ZNF766Q5HY98 468 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 C1orf140Q5VVS0 124 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 HACD4Q5VWC8 232 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 NOXA1Q86UR1 476 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 CCDC71Q8IV32 467 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 OR51D1Q8NGF3 324 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 OR13C2Q8NGS9 318 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 OR13C9Q8NGT0 318 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 C4orf36Q96KX1 117 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 LIN7BQ9HAP6 207 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 LYRM4Q9HD34 91 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 TAS2R3Q9NYW6 316 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 MYH10P35580 1976 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 ZNF705EA8MWA4 302 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 UBFD1O14562 309 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 HRO43593 1189 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 PLRG1O43660 514 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 HNF1AP20823 631 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 ID4P47928 161 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 P2RX1P51575 399 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 LIM2P55344 173 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 CLDN15P56746 228 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 ZNF45Q02386 682 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 MEF2DQ14814 521 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 H1FNTQ75WM6 255 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 SERPINA11Q86U17 422 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 ARL6IP6Q8N6S5 226 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 SLC35G3Q8N808 338 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 FRMD1Q8N878 549 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 MBOAT4Q96T53 435 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 SYT11Q9BT88 431 aa9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 DDX31Q9H8H2 851 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-202ENST00000427926 PTPRZ1P23471 2315 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 ZBTB42B2RXF5 422 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 DEGS1O15121 323 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 PRPH2P23942 346 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 HTR2AP28223 471 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 PPP5CP53041 499 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 CLN3Q13286 438 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 RAB35Q15286 201 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 OR1C1Q15619 314 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 HYAL4Q2M3T9 481 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 PGGHGQ32M88 737 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 FRMPD2BQ6IN97 320 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 MEPCEQ7L2J0 689 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 KCTD20Q7Z5Y7 419 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 FAM217AQ8IXS0 508 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 RNF113BQ8IZP6 322 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 ANKRD53Q8N9V6 530 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 SYNPRQ8TBG9 265 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 RNF170Q96K19 258 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 PRRT1Q99946 306 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 MS4A8Q9BY19 250 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 TP63Q9H3D4 680 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 MAB21L2Q9Y586 359 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 TGM6O95932 706 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 UCNP55089 124 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 TAS2R46P59540 309 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 LCN10Q6JVE6 187 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 CAMKMTQ7Z624 323 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 ACBD4Q8NC06 268 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 MORN4Q8NDC4 146 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 OR56B1Q8NGI3 324 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 SLC25A31Q9H0C2 315 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 NARFLQ9H6Q4 476 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 TREX1Q9NSU2 369 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 CNOT11Q9UKZ1 510 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 MOKQ9UQ07 419 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 GOSR2O14653 212 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 RETP07949 1114 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 TBPP20226 339 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 PRKAR1BP31321 381 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 GRB2P62993 217 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 TMEM196Q5HYL7 178 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 METRNLQ641Q3 311 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 LINC00346Q8IVM7 164 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 CMIPQ8IY22 773 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 SLC35F3Q8IY50 421 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 CADM4Q8NFZ8 388 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 OR5D18Q8NGL1 313 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 PFDN5Q99471 154 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 GSTO2Q9H4Y5 243 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 STRCP1A6NGW2 1772 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 ATXN1LP0C7T5 689 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 MYF5P13349 255 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 BDKRB2P30411 391 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 TRHRP34981 398 aaPredicted RBP9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 FOXA1P55317 472 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 CSNK1G2P78368 415 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 ANKRD16Q6P6B7 361 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 PLPP6Q8IY26 295 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 SLC43A2Q8N370 569 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 MALSU1Q96EH3 234 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 WWTR1Q9GZV5 400 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 ARL6Q9H0F7 186 aa9.17□□□□□ -0.94
CLTCL1-202ENST00000427926 NOX3Q9HBY0 568 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms