RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 PAQR7Q86WK9 346 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 VRK2Q86Y07 508 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 CRIPAKQ8N1N5 446 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 TRMT10AQ8TBZ6 339 aaKnown RBP9.77□□□□□ -0.85
TCOF1-204ENST00000427724 DPH1Q9BZG8 443 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 ARL6Q9H0F7 186 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 GABARAPL1Q9H0R8 117 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 NARFLQ9H6Q4 476 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 EGLN3Q9H6Z9 239 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 RAXQ9Y2V3 346 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 MIA3Q5JRA6 1907 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 GPR171O14626 319 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 HPGDSO60760 199 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 ECDO95905 644 aaPredicted RBP9.77□□□□□ -0.85
TCOF1-204ENST00000427724 PNMTP11086 282 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 MMP11P24347 488 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 TGM4P49221 684 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 SNU13P55769 128 aaKnown RBP9.77□□□□□ -0.85
TCOF1-204ENST00000427724 IFITM2Q01629 132 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 FIP1L1Q6UN15 594 aaKnown RBP9.77□□□□□ -0.85
TCOF1-204ENST00000427724 CPOQ8IVL8 374 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 CA13Q8N1Q1 262 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 C1orf216Q8TAB5 229 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 COX14Q96I36 57 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 ACER3Q9NUN7 267 aa9.77□□□□□ -0.85
TCOF1-204ENST00000427724 TMPRSS11DO60235 418 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SERPINA7P05543 415 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ST3GAL2Q16842 350 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 WDR74Q6RFH5 385 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 PAQR6Q6TCH4 344 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 TMEM200AQ86VY9 491 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 JAGN1Q8N5M9 183 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 PNLDC1Q8NA58 520 aaKnown RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 OR4F15Q8NGB8 312 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ST8SIA2Q92186 375 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 INTS12Q96CB8 462 aaKnown RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 VWCEQ96DN2 955 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ELMOD3Q96FG2 381 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SLC41A3Q96GZ6 507 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SAP130Q9H0E3 1048 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SLC6A15Q9H2J7 730 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SLC52A3Q9NQ40 469 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 COPZ2Q9P299 210 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 TRGV5A0A0B4J1U4 118 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ARSBP15848 533 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 CD22P20273 847 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 PCMT1P22061 227 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 CD82P27701 267 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 MRPL19P49406 292 aaKnown RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 CLDN17P56750 224 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 PSMA6P60900 246 aaKnown RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 RRAS2P62070 204 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ALG10Q5BKT4 473 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 RHBDD2Q6NTF9 364 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 MTFR2Q6P444 385 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 KCTD18Q6PI47 426 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 HAGHLQ6PII5 290 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 CREB3L2Q70SY1 520 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 CEACAM19Q7Z692 300 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ZER1Q7Z7L7 766 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SPAG16Q8N0X2 631 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ACBD7Q8N6N7 88 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 CPT1CQ8TCG5 803 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 CREB3L1Q96BA8 519 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 C3orf49Q96BT1 292 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 TAS2R3Q9NYW6 316 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SERINC4A6NH21 518 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 UNC119BA6NIH7 251 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ZNF670-ZNF695F2Z2N8 137 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 HSPA12AO43301 675 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 CXCL13O43927 109 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 GPX5O75715 221 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 C1QCP02747 245 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 BAK1Q16611 211 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 MRPL2Q5T653 305 aaKnown RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SFRP4Q6FHJ7 346 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 FAHD1Q6P587 224 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 C16orf47Q6ZP98 133 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 TRILQ7L0X0 811 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 PRSS41Q7RTY9 318 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 OR52E2Q8NGJ4 325 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ZFAND1Q8TCF1 268 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 FKBP10Q96AY3 582 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ELP4Q96EB1 424 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SGPP1Q9BX95 441 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 NXF5Q9H1B4 397 aaKnown RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ZNF226Q9NYT6 803 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 KLHL13Q9P2N7 655 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SLC7A7Q9UM01 511 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SLC6A5Q9Y345 797 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 TDRD15B5MCY1 1934 aaKnown RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ESPL1Q14674 2120 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SCN3AQ9NY46 2000 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 PRODHO43272 600 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 NCR1O76036 304 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SLC22A5O76082 557 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 HRGP04196 525 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ZFP36L2P47974 494 aaKnown RBP9.76□□□□□ -0.85
TCOF1-204ENST00000427724 SOX8P57073 446 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 FOXL2P58012 376 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms