RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 C20orf141Q9NUB4 165 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 TAS2R5Q9NYW4 299 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 ABCD2Q9UBJ2 740 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 RCE1Q9Y256 329 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 MTORP42345 2549 aa13.02□□□□□ -0.33
RTN4-210ENST00000427710 LOC102725191A0A1B0GVB3 256 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 OR6A2O95222 327 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 MT-ATP6P00846 226 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 IFNGR1P15260 489 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 FUT1P19526 365 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 TCN1P20061 433 aaPredicted RBP13.01□□□□□ -0.33
RTN4-210ENST00000427710 CD40P25942 277 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 MSX2P35548 267 aaPredicted RBP13.01□□□□□ -0.33
RTN4-210ENST00000427710 CDH11P55287 796 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 BIDP55957 195 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 MELKQ14680 651 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 CEACAM16Q2WEN9 425 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 CBLL1Q75N03 491 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 ABHD12BQ7Z5M8 362 aaPredicted RBP13.01□□□□□ -0.33
RTN4-210ENST00000427710 TGIF2LYQ8IUE0 185 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 ZNF611Q8N823 705 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 C1orf162Q8NEQ5 155 aaPredicted RBP13.01□□□□□ -0.33
RTN4-210ENST00000427710 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 LZICQ8WZA0 190 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 BCL2L2Q92843 193 aaPredicted RBP13.01□□□□□ -0.33
RTN4-210ENST00000427710 PRRC1Q96M27 445 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 FKRPQ9H9S5 495 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 CRLF2Q9HC73 371 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 TAGLN3Q9UI15 199 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 LAMP3Q9UQV4 416 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 AMDHD2Q9Y303 409 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 NOX1Q9Y5S8 564 aa13.01□□□□□ -0.33
RTN4-210ENST00000427710 CHD3Q12873 2000 aaKnown RBP13□□□□□ -0.33
RTN4-210ENST00000427710 BLOC1S5-TXNDC5H3BN57 136 aa13□□□□□ -0.33
RTN4-210ENST00000427710 RNF13O43567 381 aa13□□□□□ -0.33
RTN4-210ENST00000427710 AKAP8O43823 692 aaKnown RBP13□□□□□ -0.33
RTN4-210ENST00000427710 OR7A10O76100 309 aa13□□□□□ -0.33
RTN4-210ENST00000427710 MT-ND1P03886 318 aa13□□□□□ -0.33
RTN4-210ENST00000427710 HIST1H2ABP04908 130 aa13□□□□□ -0.33
RTN4-210ENST00000427710 SOD3P08294 240 aa13□□□□□ -0.33
RTN4-210ENST00000427710 HOXC12P31275 282 aa13□□□□□ -0.33
RTN4-210ENST00000427710 PRPS1P60891 318 aa13□□□□□ -0.33
RTN4-210ENST00000427710 NKX6-1P78426 367 aaPredicted RBP13□□□□□ -0.33
RTN4-210ENST00000427710 IFI44LQ53G44 452 aa13□□□□□ -0.33
RTN4-210ENST00000427710 GLYATQ6IB77 296 aa13□□□□□ -0.33
RTN4-210ENST00000427710 KLHL17Q6TDP4 642 aa13□□□□□ -0.33
RTN4-210ENST00000427710 KLHL24Q6TFL4 600 aa13□□□□□ -0.33
RTN4-210ENST00000427710 B3GLCTQ6Y288 498 aa13□□□□□ -0.33
RTN4-210ENST00000427710 FKBP9P1Q75LS8 142 aa13□□□□□ -0.33
RTN4-210ENST00000427710 HIST3H2AQ7L7L0 130 aa13□□□□□ -0.33
RTN4-210ENST00000427710 C20orf196Q8IYI0 205 aa13□□□□□ -0.33
RTN4-210ENST00000427710 PIK3C3Q8NEB9 887 aa13□□□□□ -0.33
RTN4-210ENST00000427710 IGFBPL1Q8WX77 278 aa13□□□□□ -0.33
RTN4-210ENST00000427710 HIST1H2ACQ93077 130 aa13□□□□□ -0.33
RTN4-210ENST00000427710 PIGTQ969N2 578 aa13□□□□□ -0.33
RTN4-210ENST00000427710 FBXW5Q969U6 566 aa13□□□□□ -0.33
RTN4-210ENST00000427710 SGTBQ96EQ0 304 aa13□□□□□ -0.33
RTN4-210ENST00000427710 LRRC37BQ96QE4 947 aa13□□□□□ -0.33
RTN4-210ENST00000427710 SPAG4Q9NPE6 437 aa13□□□□□ -0.33
RTN4-210ENST00000427710 ZNF229Q9UJW7 825 aa13□□□□□ -0.33
RTN4-210ENST00000427710 V9GYQ6 96 aa13□□□□□ -0.33
RTN4-210ENST00000427710 ZNF503-AS2A6NEH8 195 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 OR6C65A6NJZ3 312 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 ZNF726A6NNF4 738 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 E7EQL1 145 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 FFAR1O14842 300 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 IFNW1P05000 195 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 F13BP05160 661 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 ASAH2BP0C7U1 165 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 PTH2RP49190 550 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 ZP4Q12836 540 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 PGGHGQ32M88 737 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 SLC22A25Q6T423 547 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 TMEM108Q6UXF1 575 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 SLC35D2Q76EJ3 337 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 NANOGNBQ7Z5D8 188 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 PXKQ7Z7A4 578 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 C17orf78Q8N4C9 275 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 FAM86B1Q8N7N1 296 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 MOSPD2Q8NHP6 518 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 SMAP2Q8WU79 429 aaPredicted RBP12.99□□□□□ -0.33
RTN4-210ENST00000427710 TMEM171Q8WVE6 324 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 GEMIN6Q8WXD5 167 aaKnown RBP12.99□□□□□ -0.33
RTN4-210ENST00000427710 RADILQ96JH8 1075 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 PIP5K1AQ99755 562 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 TMUB1Q9BVT8 246 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 SLC19A3Q9BZV2 496 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 POLR2J2Q9GZM3 115 aaKnown RBP12.99□□□□□ -0.33
RTN4-210ENST00000427710 POLR2J3Q9H1A7 115 aaKnown RBP12.99□□□□□ -0.33
RTN4-210ENST00000427710 SEC61A2Q9H9S3 476 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 MAN2C1Q9NTJ4 1040 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 CISD1Q9NZ45 108 aaKnown RBP12.99□□□□□ -0.33
RTN4-210ENST00000427710 POU2F3Q9UKI9 436 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 MED31Q9Y3C7 131 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 MAGED1Q9Y5V3 778 aaPredicted RBP12.99□□□□□ -0.33
RTN4-210ENST00000427710 ATP23Q9Y6H3 246 aa12.99□□□□□ -0.33
RTN4-210ENST00000427710 RPL36A-HNRNPH2H7BZ11 118 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 DCTN3O75935 186 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 WNT11O96014 354 aa12.98□□□□□ -0.33
RTN4-210ENST00000427710 CELA3BP08861 270 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms