RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 RPRMLQ8N4K4 120 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 ZIC4Q8N9L1 334 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 LRRC75AQ8NAA5 344 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 RND1Q92730 232 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 INTS12Q96CB8 462 aaKnown RBP13.71□□□□□ -0.21
COL11A1-204ENST00000427239 SAMD8Q96LT4 415 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 RDH12Q96NR8 316 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 ENKD1Q9H0I2 346 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 VCX3BQ9H321 246 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 TXNIPQ9H3M7 391 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 EGLN3Q9H6Z9 239 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 NRIP3Q9NQ35 241 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 EMC9Q9Y3B6 208 aa13.71□□□□□ -0.21
COL11A1-204ENST00000427239 MCIDASD6RGH6 385 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 IDH3BO43837 385 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 BCL10O95999 233 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 TP53P04637 393 aaPredicted RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 DAP3P51398 398 aaKnown RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 RPS6KA3P51812 740 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 CRISP1P54107 249 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 GUSBP1Q15486 140 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 THSD4Q6ZMP0 1018 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 HDDC2Q7Z4H3 204 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 TEX47Q8TBZ9 253 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 ADAD1Q96M93 576 aaKnown RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 ZNF629Q9UEG4 869 aaPredicted RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 IL20RAQ9UHF4 553 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 NOSIPQ9Y314 301 aaKnown RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 ARPC3O15145 178 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 TRAF3IP2O43734 574 aaPredicted RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 AKAP8O43823 692 aaKnown RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 MRPL33O75394 65 aaKnown RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 SERPINI2O75830 405 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 SOX14O95416 240 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 IGHMP01871 453 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 TMIGD3P0DMS9 266 aaPredicted RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 IFNGR1P15260 489 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 POU1F1P28069 291 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 GIPRP48546 466 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 NPRL3Q12980 569 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 ACKR1Q16570 336 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 GPR139Q6DWJ6 353 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 GCNT2Q8N0V5 402 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 MARVELD2Q8N4S9 558 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 OR2T33Q8NG76 320 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 TMEM45BQ96B21 275 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 ZNF775Q96BV0 537 aaPredicted RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 ZNF385AQ96PM9 386 aaKnown RBP13.7□□□□□ -0.22
COL11A1-204ENST00000427239 KATNB1Q9BVA0 655 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 IFT27Q9BW83 186 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 TSSK6Q9BXA6 273 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 TEX12Q9BXU0 123 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 TBC1D23Q9NUY8 699 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 GRHPRQ9UBQ7 328 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 BAIAP2Q9UQB8 552 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 RCE1Q9Y256 329 aa13.7□□□□□ -0.22
COL11A1-204ENST00000427239 ZNF726A6NNF4 738 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 IMPA2O14732 288 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 LRRTM2O43300 516 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 MITFO75030 526 aaPredicted RBP13.69□□□□□ -0.22
COL11A1-204ENST00000427239 CTSSP25774 331 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 AGTR1P30556 359 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 KIR2DL2P43627 348 aaPredicted RBP13.69□□□□□ -0.22
COL11A1-204ENST00000427239 UQCRFS1P47985 274 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 PTDSS1P48651 473 aaKnown RBP13.69□□□□□ -0.22
COL11A1-204ENST00000427239 RPL27P61353 136 aaKnown RBP13.69□□□□□ -0.22
COL11A1-204ENST00000427239 C4orf17Q53FE4 359 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 CLEC12AQ5QGZ9 265 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 FAM205BPQ63HN1 556 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 SLC27A4Q6P1M0 643 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 IGFN1Q86VF2 1251 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 GALNT4Q8N4A0 578 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 OR6X1Q8NH79 312 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 NRG4Q8WWG1 115 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 SFXN3Q9BWM7 321 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 GABARAPL3Q9BY60 117 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 POLDIP3Q9BY77 421 aaKnown RBP13.69□□□□□ -0.22
COL11A1-204ENST00000427239 PLA2G12AQ9BZM1 189 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 ZNF346Q9UL40 294 aaKnown RBP13.69□□□□□ -0.22
COL11A1-204ENST00000427239 CLEC4AQ9UMR7 237 aa13.69□□□□□ -0.22
COL11A1-204ENST00000427239 OR6C65A6NJZ3 312 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 BHLHE40O14503 412 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 TXNDC12O95881 172 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 IL18BPO95998 194 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 IGFBP1P08833 259 aaPredicted RBP13.68□□□□□ -0.22
COL11A1-204ENST00000427239 CALRP27797 417 aaKnown RBP13.68□□□□□ -0.22
COL11A1-204ENST00000427239 NOS3P29474 1203 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 SDHAP31040 664 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 OPRM1P35372 400 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 SMSP52788 366 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 CLDN17P56750 224 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 ERVK-25P63136 954 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 CDK5Q00535 292 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 ESPL1Q14674 2120 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 PTGES3Q15185 160 aaKnown RBP13.68□□□□□ -0.22
COL11A1-204ENST00000427239 AAED1Q7RTV5 226 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 FAM122BQ7Z309 247 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 FJX1Q86VR8 437 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 LNX2Q8N448 690 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 ARIH2OSQ8N7S6 290 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms