RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 UMPSP11172 480 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 FUT1P19526 365 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 MFSD13AQ14CX5 517 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 OR7E24Q6IFN5 339 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 NHLRC1Q6VVB1 395 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 CBLL1Q75N03 491 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 P2RY8Q86VZ1 359 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 MEX3DQ86XN8 651 aaKnown RBP11.93□□□□□ -0.5
SNX3-204ENST00000426155 C1orf162Q8NEQ5 155 aaPredicted RBP11.93□□□□□ -0.5
SNX3-204ENST00000426155 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 FAM162AQ96A26 154 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 USB1Q9BQ65 265 aaKnown RBP11.93□□□□□ -0.5
SNX3-204ENST00000426155 LINC00470Q9BZP3 86 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 YY1AP1Q9H869 796 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 GPR35Q9HC97 309 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 SPAG4Q9NPE6 437 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 NGBQ9NPG2 151 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 NANSQ9NR45 359 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 TAS2R5Q9NYW4 299 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 EDARQ9UNE0 448 aa11.93□□□□□ -0.5
SNX3-204ENST00000426155 LOC102725191A0A1B0GVB3 256 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 SLC35F4A4IF30 521 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 SHISA9B4DS77 424 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 M0R3G1 203 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 FFAR1O14842 300 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 MT-ND1P03886 318 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 ASAH2BP0C7U1 165 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 TCN1P20061 433 aaPredicted RBP11.92□□□□□ -0.5
SNX3-204ENST00000426155 HOXC12P31275 282 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 MSX2P35548 267 aaPredicted RBP11.92□□□□□ -0.5
SNX3-204ENST00000426155 GTF2A1P52655 376 aaPredicted RBP11.92□□□□□ -0.5
SNX3-204ENST00000426155 ARF1P84077 181 aaKnown RBP11.92□□□□□ -0.5
SNX3-204ENST00000426155 TGFBR3Q03167 851 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 CAMK2DQ13557 499 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 MELKQ14680 651 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 CEACAM16Q2WEN9 425 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 TBRG1Q3YBR2 411 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 ZNF672Q499Z4 452 aaPredicted RBP11.92□□□□□ -0.5
SNX3-204ENST00000426155 HMBOX1Q6NT76 420 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 B3GLCTQ6Y288 498 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 C20orf204Q6ZNR8 217 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 TSEN54Q7Z6J9 526 aaKnown RBP11.92□□□□□ -0.5
SNX3-204ENST00000426155 FAM86B1Q8N7N1 296 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 TMEM239Q8WW34 195 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 IGFBPL1Q8WX77 278 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 PERPQ96FX8 193 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 PRRC1Q96M27 445 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 LRRC37BQ96QE4 947 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 CCT8L2Q96SF2 557 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 SLC19A3Q9BZV2 496 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 FKRPQ9H9S5 495 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 CRLF2Q9HC73 371 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 MAN2C1Q9NTJ4 1040 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 BEX4Q9NWD9 120 aaPredicted RBP11.92□□□□□ -0.5
SNX3-204ENST00000426155 TAGLN3Q9UI15 199 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 ZNF229Q9UJW7 825 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 USF3Q68DE3 2245 aa11.92□□□□□ -0.5
SNX3-204ENST00000426155 ACANP16112 2415 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 ZNF503-AS2A6NEH8 195 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 RNF13O43567 381 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 DCTN3O75935 186 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 IFNW1P05000 195 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 SOD3P08294 240 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 IFNGR1P15260 489 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 CD40P25942 277 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 RBM34P42696 430 aaKnown RBP11.91□□□□□ -0.5
SNX3-204ENST00000426155 CDH11P55287 796 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 BIDP55957 195 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 ADAM8P78325 824 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 IFI44LQ53G44 452 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 TMEM108Q6UXF1 575 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 NANOGNBQ7Z5D8 188 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 ABHD12BQ7Z5M8 362 aaPredicted RBP11.91□□□□□ -0.5
SNX3-204ENST00000426155 PXKQ7Z7A4 578 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 C20orf196Q8IYI0 205 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 GPR137CQ8N3F9 429 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 C17orf78Q8N4C9 275 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 FITM2Q8N6M3 262 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 ZNF611Q8N823 705 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 PIK3C3Q8NEB9 887 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 GEMIN6Q8WXD5 167 aaKnown RBP11.91□□□□□ -0.5
SNX3-204ENST00000426155 LZICQ8WZA0 190 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 BCL2L2Q92843 193 aaPredicted RBP11.91□□□□□ -0.5
SNX3-204ENST00000426155 FBXW5Q969U6 566 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 POLR2J2Q9GZM3 115 aaKnown RBP11.91□□□□□ -0.5
SNX3-204ENST00000426155 POLR2J3Q9H1A7 115 aaKnown RBP11.91□□□□□ -0.5
SNX3-204ENST00000426155 SEC61A2Q9H9S3 476 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 LAMP3Q9UQV4 416 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 AMDHD2Q9Y303 409 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 NOX1Q9Y5S8 564 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 V9GYQ6 96 aa11.91□□□□□ -0.5
SNX3-204ENST00000426155 OR6C65A6NJZ3 312 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 BLOC1S5-TXNDC5H3BN57 136 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 AKAP8O43823 692 aaKnown RBP11.9□□□□□ -0.5
SNX3-204ENST00000426155 SMPD2O60906 423 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 OR7A10O76100 309 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 PRSS23O95084 383 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 OR6A2O95222 327 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 F13BP05160 661 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 DANCRP0C864 163 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms