RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 DNM1P34Q6PK57 102 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 RPTNQ6XPR3 784 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 Q6ZPB1 254 aaPredicted RBP9.01□□□□□ -0.97
CD44-207ENST00000425428 AAED1Q7RTV5 226 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 ADCK1Q86TW2 530 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 RNF128Q8TEB7 428 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 ZNF566Q969W8 418 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 OTULINQ96BN8 352 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 LRRC46Q96FV0 321 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 RBP7Q96R05 134 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 ZNF184Q99676 751 aaPredicted RBP9.01□□□□□ -0.97
CD44-207ENST00000425428 IER3IP1Q9Y5U9 82 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 PRRC2CQ9Y520 2896 aaKnown RBP9.01□□□□□ -0.97
CD44-207ENST00000425428 HSPB2A8KAH6 182 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 E9PLN8 166 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 MS4A18H0YCH9 400 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 ARPC3O15145 178 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 AHCYL1O43865 530 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 FZD7O75084 574 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 PPP1R3DO95685 299 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 SNAP29O95721 258 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 IFNGR1P15260 489 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 SLC16A1P53985 500 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 ERVK-25P63136 954 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 TLE1Q04724 770 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 SLC17A1Q14916 467 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 HSPB2Q16082 182 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 PGGHGQ32M88 737 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 MS4A18Q3C1V0 323 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 ABLIM2Q6H8Q1 611 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 DOLPP1Q86YN1 238 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 MED12LQ86YW9 2145 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 KDM8Q8N371 416 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 CNEP1R1Q8N9A8 125 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 OR6N1Q8NGY5 312 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 MOSPD2Q8NHP6 518 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 INTS12Q96CB8 462 aaKnown RBP9.01□□□□□ -0.97
CD44-207ENST00000425428 Q96MT0 163 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 DOCK7Q96N67 2140 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 GPX7Q96SL4 187 aaPredicted RBP9.01□□□□□ -0.97
CD44-207ENST00000425428 GPA33Q99795 319 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 VKORC1Q9BQB6 163 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 ADI1Q9BV57 179 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 SLC25A19Q9HC21 320 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 ASB6Q9NWX5 421 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 TVP23BQ9NYZ1 205 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 COQ3Q9NZJ6 369 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 UPB1Q9UBR1 384 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 REV1Q9UBZ9 1251 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 IL20RAQ9UHF4 553 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 TMEFF2Q9UIK5 374 aaPredicted RBP9.01□□□□□ -0.97
CD44-207ENST00000425428 OSGIN2Q9Y236 505 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 RCE1Q9Y256 329 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 ZNF835Q9Y2P0 537 aa9.01□□□□□ -0.97
CD44-207ENST00000425428 ESPL1Q14674 2120 aa9□□□□□ -0.97
CD44-207ENST00000425428 CENPBD1B2RD01 187 aa9□□□□□ -0.97
CD44-207ENST00000425428 ARHGEF9O43307 516 aa9□□□□□ -0.97
CD44-207ENST00000425428 MITFO75030 526 aaPredicted RBP9□□□□□ -0.97
CD44-207ENST00000425428 IGHMP01871 453 aa9□□□□□ -0.97
CD44-207ENST00000425428 TMIGD3P0DMS9 266 aaPredicted RBP9□□□□□ -0.97
CD44-207ENST00000425428 OPRM1P35372 400 aa9□□□□□ -0.97
CD44-207ENST00000425428 CAPGP40121 348 aa9□□□□□ -0.97
CD44-207ENST00000425428 BIDP55957 195 aa9□□□□□ -0.97
CD44-207ENST00000425428 LGALS3BPQ08380 585 aa9□□□□□ -0.97
CD44-207ENST00000425428 CD47Q08722 323 aa9□□□□□ -0.97
CD44-207ENST00000425428 KEAP1Q14145 624 aa9□□□□□ -0.97
CD44-207ENST00000425428 ACKR1Q16570 336 aa9□□□□□ -0.97
CD44-207ENST00000425428 KRT80Q6KB66 452 aa9□□□□□ -0.97
CD44-207ENST00000425428 NIPAL3Q6P499 406 aa9□□□□□ -0.97
CD44-207ENST00000425428 PTCHD4Q6ZW05 846 aa9□□□□□ -0.97
CD44-207ENST00000425428 CREB3L2Q70SY1 520 aa9□□□□□ -0.97
CD44-207ENST00000425428 IGFN1Q86VF2 1251 aa9□□□□□ -0.97
CD44-207ENST00000425428 C8orf59Q8N0T1 100 aaPredicted RBP9□□□□□ -0.97
CD44-207ENST00000425428 UBE2J2Q8N2K1 259 aa9□□□□□ -0.97
CD44-207ENST00000425428 GPR137CQ8N3F9 429 aa9□□□□□ -0.97
CD44-207ENST00000425428 LNX2Q8N448 690 aa9□□□□□ -0.97
CD44-207ENST00000425428 OR6X1Q8NH79 312 aa9□□□□□ -0.97
CD44-207ENST00000425428 FAM81AQ8TBF8 368 aa9□□□□□ -0.97
CD44-207ENST00000425428 ABHD3Q8WU67 409 aa9□□□□□ -0.97
CD44-207ENST00000425428 TRUB1Q8WWH5 349 aaKnown RBP9□□□□□ -0.97
CD44-207ENST00000425428 RND1Q92730 232 aa9□□□□□ -0.97
CD44-207ENST00000425428 APH1AQ96BI3 265 aa9□□□□□ -0.97
CD44-207ENST00000425428 SLC25A44Q96H78 314 aaPredicted RBP9□□□□□ -0.97
CD44-207ENST00000425428 BCO1Q9HAY6 547 aa9□□□□□ -0.97
CD44-207ENST00000425428 NRIP3Q9NQ35 241 aa9□□□□□ -0.97
CD44-207ENST00000425428 FAM118AQ9NWS6 357 aa9□□□□□ -0.97
CD44-207ENST00000425428 CLCF1Q9UBD9 225 aa9□□□□□ -0.97
CD44-207ENST00000425428 ZNF346Q9UL40 294 aaKnown RBP9□□□□□ -0.97
CD44-207ENST00000425428 RAB26Q9ULW5 256 aa9□□□□□ -0.97
CD44-207ENST00000425428 ATRXP46100 2492 aa9□□□□□ -0.97
CD44-207ENST00000425428 ZZEF1O43149 2961 aa9□□□□□ -0.97
CD44-207ENST00000425428 EPG5Q9HCE0 2579 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 SHANK1Q9Y566 2161 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 IGKV3D-15A0A087WSY6 115 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 TEX13CA0A0J9YWL9 993 aa8.99□□□□□ -0.97
CD44-207ENST00000425428 MBD3L4A6NDZ8 208 aaPredicted RBP8.99□□□□□ -0.97
CD44-207ENST00000425428 MBD3L3A6NE82 208 aaPredicted RBP8.99□□□□□ -0.97
CD44-207ENST00000425428 MBD3L5A6NJ08 208 aaPredicted RBP8.99□□□□□ -0.97
CD44-207ENST00000425428 PRR23D1E9PI22 279 aaPredicted RBP8.99□□□□□ -0.97
CD44-207ENST00000425428 CCL21O00585 134 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms