RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 UGT2A3Q6UWM9 527 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 SLC35D2Q76EJ3 337 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 GGNQ86UU5 652 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 JAZF1Q86VZ6 243 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 UBQLNLQ8IYU4 475 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 ZNF786Q8N393 782 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 IQCF1Q8N6M8 205 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 ARIH2OSQ8N7S6 290 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 EXD3Q8N9H8 876 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 OR52E2Q8NGJ4 325 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 OR4Q3Q8NH05 313 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 OR10D3Q8NH80 312 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 FNDC8Q8TC99 324 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 IPCEF1Q8WWN9 437 aaPredicted RBP9.25□□□□□ -0.93
MDC1-205ENST00000425072 UBE2FQ969M7 185 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 INTS12Q96CB8 462 aaKnown RBP9.25□□□□□ -0.93
MDC1-205ENST00000425072 DNAJA3Q96EY1 480 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 ADGRG7Q96K78 797 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 ADAD1Q96M93 576 aaKnown RBP9.25□□□□□ -0.93
MDC1-205ENST00000425072 SNX18Q96RF0 628 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 IL4I1Q96RQ9 567 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 PRRG4Q9BZD6 226 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 SLC25A18Q9H1K4 315 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 SLC6A15Q9H2J7 730 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.25□□□□□ -0.93
MDC1-205ENST00000425072 NPIPA1Q9UND3 350 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 MED12Q93074 2177 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 CENPBD1B2RD01 187 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 NPIPA2E9PIF3 369 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 NPIPA3F8WFD2 350 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 GPR171O14626 319 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 ARHGEF9O43307 516 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 AKAP8O43823 692 aaKnown RBP9.24□□□□□ -0.93
MDC1-205ENST00000425072 CXCL13O43927 109 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 PRKYO43930 277 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 MRPS14O60783 128 aaKnown RBP9.24□□□□□ -0.93
MDC1-205ENST00000425072 IGHMP01871 453 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 RPSAP08865 295 aaKnown RBP9.24□□□□□ -0.93
MDC1-205ENST00000425072 HOXD4P09016 255 aaPredicted RBP9.24□□□□□ -0.93
MDC1-205ENST00000425072 NR2C1P13056 603 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 GABRB1P18505 474 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 ACVR1BP36896 505 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 CENPAP49450 140 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 BLVRAP53004 296 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 HSF1Q00613 529 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 PMP22Q01453 160 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 SRYQ05066 204 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.24□□□□□ -0.93
MDC1-205ENST00000425072 KLRB1Q12918 225 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 POU4F3Q15319 338 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 ACKR1Q16570 336 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 CTU2Q2VPK5 515 aaKnown RBP9.24□□□□□ -0.93
MDC1-205ENST00000425072 TMEM201Q5SNT2 666 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 ZNF362Q5T0B9 420 aaPredicted RBP9.24□□□□□ -0.93
MDC1-205ENST00000425072 NXNL2Q5VZ03 156 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 CXXC5Q7LFL8 322 aaKnown RBP9.24□□□□□ -0.93
MDC1-205ENST00000425072 ADCK1Q86TW2 530 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 GPAT4Q86UL3 456 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 CCDC71Q8IV32 467 aaPredicted RBP9.24□□□□□ -0.93
MDC1-205ENST00000425072 CPOQ8IVL8 374 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 GID4Q8IVV7 300 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 GHDCQ8N2G8 530 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 BPIFB6Q8NFQ5 453 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 ZPLD1Q8TCW7 415 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 PTP4A1Q93096 173 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 MYDGFQ969H8 173 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 WBP1Q96G27 269 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 WDYHV1Q96HA8 205 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 LRR1Q96L50 414 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 Q96M85 177 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 RBP7Q96R05 134 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 TAAR6Q96RI8 345 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 PLSCR2Q9NRY7 297 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 PARPBPQ9NWS1 579 aa9.24□□□□□ -0.93
MDC1-205ENST00000425072 CLCA1A8K7I4 914 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 PRODHO43272 600 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 CYTIPO60759 359 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 IFNGR1P15260 489 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 HIST1H1CP16403 213 aaKnown RBP9.23□□□□□ -0.93
MDC1-205ENST00000425072 EEF1B2P24534 225 aaKnown RBP9.23□□□□□ -0.93
MDC1-205ENST00000425072 P2RY4P51582 365 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 SLC25A1P53007 311 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 RASGEF1BQ0VAM2 473 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 SLC17A1Q14916 467 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 PON3Q15166 354 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 RNPS1Q15287 305 aaKnown RBP9.23□□□□□ -0.93
MDC1-205ENST00000425072 NADK2Q4G0N4 442 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 KCTD21Q4G0X4 260 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 SOWAHCQ53LP3 525 aaPredicted RBP9.23□□□□□ -0.93
MDC1-205ENST00000425072 ARMC4Q5T2S8 1044 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 CREB3L2Q70SY1 520 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 MEPCEQ7L2J0 689 aaKnown RBP9.23□□□□□ -0.93
MDC1-205ENST00000425072 FCRLAQ7L513 359 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 FAM122BQ7Z309 247 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 IGFN1Q86VF2 1251 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 SIAH3Q8IW03 269 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 CCDC103Q8IW40 242 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 KDM8Q8N371 416 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 OR2T4Q8NH00 348 aa9.23□□□□□ -0.93
MDC1-205ENST00000425072 OR4K13Q8NH42 304 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms