RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SERPINH1P50454 418 aaKnown RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 RAB13P51153 203 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 TMBIM6P55061 237 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 SPCS3P61009 180 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 PSMC5P62195 406 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 CNTN2Q02246 1040 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 BST2Q10589 180 aaKnown RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 BNIP2Q12982 314 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 NME3Q13232 169 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 PMS2P3Q13401 168 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 AQP6Q13520 282 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 MEF2DQ14814 521 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 NCF4Q15080 339 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 RPS6KA1Q15418 735 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 SPHARQ15513 63 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 AANATQ16613 207 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 UBE2SQ16763 222 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 MAJINQ3KP22 176 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 GLYR1Q49A26 553 aaPredicted RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 DNAL1Q4LDG9 190 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 CDKL4Q5MAI5 379 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 C6orf52Q5T4I8 152 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 GPR107Q5VW38 600 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 KDELC1Q6UW63 502 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 MFSD7Q6UXD7 560 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 HDDC2Q7Z4H3 204 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 SNX29P2Q8IUI4 249 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 OR8H2Q8N162 312 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 TBC1D19Q8N5T2 526 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 URGCPQ8TCY9 931 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 ZFP90Q8TF47 636 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 ASZ1Q8WWH4 475 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 S100ZQ8WXG8 99 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 ART4Q93070 314 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 C18orf25Q96B23 403 aaPredicted RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 ZHX1-C8orf76Q96EF9 292 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 MRPL48Q96GC5 212 aaKnown RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 HSFY1Q96LI6 401 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 SORT1Q99523 831 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 SERPINI1Q99574 410 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 RIT2Q99578 217 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 ATG101Q9BSB4 218 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 TMEM121Q9BTD3 319 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 THTPAQ9BU02 230 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 CHID1Q9BWS9 393 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 AP1M1Q9BXS5 423 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 EDEM3Q9BZQ6 932 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 SLC19A3Q9BZV2 496 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 C6orf62Q9GZU0 229 aaPredicted RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 NAPBQ9H115 298 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 CXXC4Q9H2H0 198 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 PPA2Q9H2U2 334 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 RHBGQ9H310 441 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 CDC42EP4Q9H3Q1 356 aaKnown RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 NCOR1P1Q9H4R4 102 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 ASB7Q9H672 318 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 LRRC19Q9H756 370 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 CXorf21Q9HAI6 301 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 HMG20AQ9NP66 347 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 RPRD1BQ9NQG5 326 aaKnown RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 POLE4Q9NR33 117 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 FBXO8Q9NRD0 319 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 PNPLA3Q9NST1 481 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 NKIRAS1Q9NYS0 192 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 C5AR2Q9P296 337 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 ARMCX3Q9UH62 379 aaPredicted RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 CBY1Q9Y3M2 126 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 CHTOPQ9Y3Y2 248 aaKnown RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 MFHAS1Q9Y4C4 1052 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 AP4S1Q9Y587 144 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 HSPE1-MOB4S4R3N1 261 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 ARHGAP5Q13017 1502 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 DLEC1Q9Y238 1755 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 CITO14578 2027 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 NUP153P49790 1475 aaKnown RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 MTCL1Q9Y4B5 1905 aaKnown RBP2.5□□□□□ -2.01
LINC01040-201ENST00000425048 TET3O43151 1660 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 TOPAZ1Q8N9V7 1692 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 ZNF609O15014 1411 aa2.5□□□□□ -2.01
LINC01040-201ENST00000425048 MICAL3Q7RTP6 2002 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ZNF638Q14966 1978 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 PKD1L3Q7Z443 1732 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 A0A1W2PRG6 482 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ARHGAP42A6NI28 874 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 CENPXA8MT69 81 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 SERPINE3A8MV23 424 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 A8MXE2 369 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ANKRD63C9JTQ0 380 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 H0Y626 953 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 CACNB4O00305 520 aaPredicted RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 SLC17A2O00624 439 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ABCD4O14678 606 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 SLC7A4O43246 635 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TYROBPO43914 113 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TOM1L1O75674 476 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 UPK1BO75841 260 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 IDH1O75874 414 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TGDSO95455 350 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 LDOC1O95751 146 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms