RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 UBBP0CG47 229 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 UBCP0CG48 685 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 SFTPCP11686 197 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 NME1P15531 152 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 RPS27AP62979 156 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 UBA52P62987 128 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 AMZ1Q400G9 498 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 BAIAP2L2Q6UXY1 529 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 TMPPEQ6ZT21 453 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 CHST9Q7L1S5 443 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 LINC00471Q8N535 108 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 SLC16A11Q8NCK7 471 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 OR51D1Q8NGF3 324 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 KLHL31Q9H511 634 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 FRMPD3Q5JV73 1810 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 CFAP54Q96N23 3096 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 VWA8A3KMH1 1905 aa10.34□□□□□ -0.75
SEC61A1-202ENST00000424880 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 C13orf42A0A1B0GVH6 325 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 NAP1L6A6NFF2 107 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 UNC119BA6NIH7 251 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 WASH3PC4AMC7 463 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 CACNB4O00305 520 aaPredicted RBP10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 BHLHE40O14503 412 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 YIF1AO95070 293 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 ZFPL1O95159 310 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 CD63P08962 238 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 PAX6P26367 422 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 EIF2S3P41091 472 aaKnown RBP10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 PDZD11Q5EBL8 140 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 UNQ6494/PRO21346Q6UXR6 183 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 CD163Q86VB7 1156 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 OR9A2Q8NGT5 310 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 MRPL38Q96DV4 380 aaKnown RBP10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 SMIM19Q96E16 107 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 RPS10P5Q9NQ39 176 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 UQCC1Q9NVA1 299 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 KLHL42Q9P2K6 505 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 ADAM18Q9Y3Q7 739 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 PCYT1BQ9Y5K3 369 aaPredicted RBP10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 TCF20Q9UGU0 1960 aaKnown RBP10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 C9JQL5 133 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 DOK2O60496 412 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 OR4E1P0C645 316 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 PGAM2P15259 253 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 HTR2AP28223 471 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 HOXA6P31267 233 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 PGDP52209 483 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 IL10RAQ13651 578 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 CDK5R1Q15078 307 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 TMEM205Q6UW68 189 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 GID4Q8IVV7 300 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 OR4N5Q8IXE1 308 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 DCAF4L2Q8NA75 395 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 OR4E2Q8NGC2 313 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 OR51A4Q8NGJ6 313 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 OR10AC1Q8NH08 325 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 SUN3Q8TAQ9 357 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 CNTNAP3BQ96NU0 1288 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 OR7D2Q96RA2 312 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 TGIF2Q9GZN2 237 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 EGLN1Q9GZT9 426 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 UFSP2Q9NUQ7 469 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 PRR13Q9NZ81 148 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 V9GY05 133 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 GXYLT2A0PJZ3 443 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 ACOT7O00154 380 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 OIP5O43482 229 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 ALOX12BO75342 701 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 ARG1P05089 322 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 ADRA2CP18825 462 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 SSR2P43308 183 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 TMEM44Q2T9K0 475 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 MBOAT2Q6ZWT7 520 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 BHLHE23Q8NDY6 225 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 OR4C6Q8NH72 309 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 ROBO4Q8WZ75 1007 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 CNRIP1Q96F85 164 aaPredicted RBP10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 TNFRSF13CQ96RJ3 184 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 LMF1Q96S06 567 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 PLEKHA1Q9HB21 404 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 FBXO34Q9NWN3 711 aa10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 METTL1Q9UBP6 276 aaKnown RBP10.33□□□□□ -0.76
SEC61A1-202ENST00000424880 CXorf65A6NEN9 183 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 PRR32B1ATL7 298 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 SNRNP70P08621 437 aaKnown RBP10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 MUC1P15941 1255 aaPredicted RBP10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 CD1CP29017 333 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 STARD6P59095 220 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC9A5Q14940 896 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 NR0B2Q15466 257 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 PRAMEF14Q5SWL7 426 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 ABHD13Q7L211 337 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 BIVMQ86UB2 503 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 OR4S1Q8NGB4 309 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 ZPLD1Q8TCW7 415 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 Q96M85 177 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 IP6K3Q96PC2 410 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 TSSK2Q96PF2 358 aa10.32□□□□□ -0.76
SEC61A1-202ENST00000424880 MYADMQ96S97 322 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms