RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 SERPINI2O75830 405 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 ZNF682O95780 498 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 CDH2P19022 906 aaPredicted RBP11.32□□□□□ -0.6
VRK3-203ENST00000424804 FABP6P51161 128 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 TAS2R41P59536 307 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 PSME3P61289 254 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 MXRA7P84157 204 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 SWI5Q1ZZU3 235 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 TMEM249Q2WGJ8 235 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 FAM69AQ5T7M9 428 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 OR7E24Q6IFN5 339 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 NIPAL3Q6P499 406 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 TTC33Q6PID6 262 aaPredicted RBP11.32□□□□□ -0.6
VRK3-203ENST00000424804 SLC22A25Q6T423 547 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 C6orf89Q6UWU4 347 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 SLC15A3Q8IY34 581 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 ZNF525Q8N782 197 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 ZNF417Q8TAU3 575 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 ADAMTS16Q8TE57 1224 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 TMEM45BQ96B21 275 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 ZNF587Q96SQ5 575 aaPredicted RBP11.32□□□□□ -0.6
VRK3-203ENST00000424804 HOPXQ9BPY8 73 aaPredicted RBP11.32□□□□□ -0.6
VRK3-203ENST00000424804 FAIMQ9NVQ4 179 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 ADA2Q9NZK5 511 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 RASD1Q9Y272 281 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 AP3M1Q9Y2T2 418 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 ARL2BPQ9Y2Y0 163 aa11.32□□□□□ -0.6
VRK3-203ENST00000424804 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.32□□□□□ -0.64e-10■■■■■ 37.9
VRK3-203ENST00000424804 TRAPPC13A5PLN9 417 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 A8MV72 311 aaPredicted RBP11.31□□□□□ -0.6
VRK3-203ENST00000424804 VWC2LB2RUY7 222 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 FTCDNL1E5RQL4 147 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 M0R1B8 84 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 CXCR6O00574 342 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 CHP2O43745 196 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 LY6HO94772 140 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 VAMP5O95183 116 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 NCK1P16333 377 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 ZNF43P17038 809 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 KDELR2P33947 212 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 GSK3BP49841 420 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 CRYBA2P53672 197 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 CLDN17P56750 224 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 VLDLRP98155 873 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 LGALS3BPQ08380 585 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 ZNF544Q6NX49 715 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 ZNF613Q6PF04 617 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 C5orf46Q6UWT4 87 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 LINGO2Q7L985 606 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 RNF148Q8N7C7 305 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 C1orf162Q8NEQ5 155 aaPredicted RBP11.31□□□□□ -0.6
VRK3-203ENST00000424804 C10orf105Q8TEF2 133 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 FAM162AQ96A26 154 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 SLC41A3Q96GZ6 507 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 ADAD1Q96M93 576 aaKnown RBP11.31□□□□□ -0.6
VRK3-203ENST00000424804 LRRC37BQ96QE4 947 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 KCTD14Q9BQ13 255 aaPredicted RBP11.31□□□□□ -0.6
VRK3-203ENST00000424804 SF3B5Q9BWJ5 86 aaKnown RBP11.31□□□□□ -0.6
VRK3-203ENST00000424804 ASPNQ9BXN1 380 aa11.31□□□□□ -0.6
VRK3-203ENST00000424804 FMO6PO60774 539 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 DCTN3O75935 186 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 TP53P04637 393 aaPredicted RBP11.3□□□□□ -0.6
VRK3-203ENST00000424804 IGHV4-31P0DP07 118 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 UMPSP11172 480 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 AHCYP23526 432 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 MPGP29372 298 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 PRDX6P30041 224 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
VRK3-203ENST00000424804 YAP1P46937 504 aaKnown RBP11.3□□□□□ -0.6
VRK3-203ENST00000424804 SELENOPP49908 381 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 NUDT6P53370 316 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 DSCR9P59020 149 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 PMS2P3Q13401 168 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
VRK3-203ENST00000424804 PODNL1Q6PEZ8 512 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 KLHL17Q6TDP4 642 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 CREB3L2Q70SY1 520 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 H1FNTQ75WM6 255 aaPredicted RBP11.3□□□□□ -0.6
VRK3-203ENST00000424804 TSPYL5Q86VY4 417 aaPredicted RBP11.3□□□□□ -0.6
VRK3-203ENST00000424804 FBXL14Q8N1E6 418 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 C17orf78Q8N4C9 275 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 LZICQ8WZA0 190 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 NELFAQ9H3P2 528 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 TMEM160Q9NX00 188 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 EGFL7Q9UHF1 273 aa11.3□□□□□ -0.6
VRK3-203ENST00000424804 C11orf98E9PRG8 122 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 ATP6V1G2-DDX39BF2Z307 99 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 FZD7O75084 574 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 OR6A2O95222 327 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 CH25HO95992 272 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 SERPINA1P01009 418 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 BGLAPP02818 100 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 THY1P04216 161 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 TCN1P20061 433 aaPredicted RBP11.29□□□□□ -0.6
VRK3-203ENST00000424804 EFNA4P52798 201 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 PIN1Q13526 163 aaPredicted RBP11.29□□□□□ -0.6
VRK3-203ENST00000424804 RAB35Q15286 201 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 HIKESHIQ53FT3 197 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 CARD17Q5XLA6 110 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 CLEC2AQ6UVW9 174 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms