RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 IGHV2-70P01814 119 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CHRM2P08172 466 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CHRM4P08173 479 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CRABP2P29373 138 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 HMOX2P30519 316 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CXCR5P32302 372 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 MDH2P40926 338 aaKnown RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 GSTM5P46439 218 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CLDN17P56750 224 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 RAB1AP62820 205 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 H3F3AP84243 136 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 SKP2Q13309 424 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 C1DQ13901 141 aaKnown RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 LASP1Q14847 261 aaKnown RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 RAB39AQ14964 217 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 GPR68Q15743 365 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 FXNQ16595 210 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 IMPG1Q17R60 797 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 TMEM155Q4W5P6 130 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CARD17Q5XLA6 110 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 TTC27Q6P3X3 843 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF813Q6ZN06 617 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF662Q6ZS27 426 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 EIF3MQ7L2H7 374 aaKnown RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 NLRC3Q7RTR2 1065 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CMC1Q7Z7K0 106 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 NDUFA11Q86Y39 141 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 ZIC4Q8N9L1 334 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 VPS37AQ8NEZ2 397 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF519Q8TB69 540 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 GRK7Q8WTQ7 553 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 NSMAFQ92636 917 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 LHX4Q969G2 390 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 APIPQ96GX9 242 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 RCC1LQ96I51 464 aaKnown RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 GPR78Q96P69 363 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 PRPF18Q99633 342 aaKnown RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CCDC106Q9BWC9 280 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 GPR61Q9BZJ8 451 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 GPR35Q9HC97 309 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 ZCCHC3Q9NUD5 404 aaKnown RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 TMEM106BQ9NUM4 274 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 EXD2Q9NVH0 621 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 NOP53Q9NZM5 478 aaKnown RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 SLC17A7Q9P2U7 560 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 FBLN5Q9UBX5 448 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 FBXL3Q9UKT7 428 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 GUCA1BQ9UMX6 200 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 RCE1Q9Y256 329 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 POFUT2Q9Y2G5 429 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 CAB39Q9Y376 341 aaPredicted RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 TMED7Q9Y3B3 224 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 REXO2Q9Y3B8 237 aaKnown RBP5.27□□□□□ -1.57
SDCBP-203ENST00000424270 ARHGAP32A7KAX9 2087 aa5.27□□□□□ -1.57
SDCBP-203ENST00000424270 IGHV1-69DA0A0B4J2H0 117 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 AQP7P3A6NL99 342 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CEACAM18A8MTB9 384 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF99A8MXY4 864 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 HMGB1P1B2RPK0 211 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 TMEM229AB2RXF0 380 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 RNASEK-C17orf49H0YIS7 233 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 P2RY10O00398 339 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 MANBAO00462 879 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 SMIM24O75264 130 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 UBL3O95164 117 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 WISP3O95389 354 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 IGHV1-69P01742 117 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CD28P10747 220 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 THRBP10828 461 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CCL2P13500 99 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 HSD3B1P14060 373 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CHN1P15882 459 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CCNOP22674 350 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 TNFSF4P23510 183 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 HSD3B2P26439 372 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 SPRP35270 261 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CRATP43155 626 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 HTR3AP46098 478 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 IDH2P48735 452 aaKnown RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 POLR2HP52434 150 aaKnown RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 ARL4CP56559 192 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 ERVS71-1P61550 626 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 RAE1P78406 368 aaKnown RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 TNFAIP6P98066 277 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 DLG1Q12959 904 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 TRAF3Q13114 568 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 HNRNPA0Q13151 305 aaKnown RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 PMS2P3Q13401 168 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 TP53BP2Q13625 1128 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 PRSS53Q2L4Q9 553 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 GGTA1PQ4G0N0 100 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 ZMAT1Q5H9K5 638 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 METTL11BQ5VVY1 283 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CLEC6AQ6EIG7 209 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 ANKRD26P1Q6NSI1 321 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 SLC27A4Q6P1M0 643 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 ZCCHC12Q6PEW1 402 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 UNQ9370/PRO34162Q6UXP9 181 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CREB3L2Q70SY1 520 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 FBXO36Q8NEA4 188 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms