RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 FAM110BQ8TC76 370 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 GPR151Q8TDV0 419 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 RND1Q92730 232 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TMBIM1Q969X1 311 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 GIMAP5Q96F15 307 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 MAGED4Q96JG8 741 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TMEM68Q96MH6 324 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 CCDC115Q96NT0 180 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 MS4A4EQ96PG1 132 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 OR52B2Q96RD2 323 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 NODALQ96S42 347 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 STACQ99469 402 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 PIGUQ9H490 435 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 RABEP2Q9H5N1 569 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 METTL7AQ9H8H3 244 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ANKRA2Q9H9E1 313 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 PROK2Q9HC23 129 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ACKR4Q9NPB9 350 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SLCO1B3Q9NPD5 702 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 TCF7L2Q9NQB0 619 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SDHAF3Q9NRP4 125 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ZCCHC3Q9NUD5 404 aaKnown RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 B4GALT7Q9UBV7 327 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 FAF1Q9UNN5 650 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF835Q9Y2P0 537 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 PAM16Q9Y3D7 125 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 SESN1Q9Y6P5 492 aa2.23□□□□□ -2.05
VPS13A-208ENST00000423463 ATRXP46100 2492 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 DNAH14Q0VDD8 3507 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 TNRC6AQ8NDV7 1962 aaKnown RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 hCG_1807616A0A1W2PRN6 198 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 PLSCR5A0PG75 271 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 PINLYPA6NC86 204 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 E9PBE3 544 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 TFECO14948 347 aaPredicted RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 HS6ST1O60243 411 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 FADS1O60427 444 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 HCN1O60741 890 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 ICOSLGO75144 302 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 UGT2B11O75310 529 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 CBR3O75828 277 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 NDUFB4O95168 129 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 CPSF4O95639 269 aaKnown RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 AK1P00568 194 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 HMGN2P05204 90 aaKnown RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 GUSBP08236 651 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 HOXD4P09016 255 aaPredicted RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 ZCCHC18P0CG32 403 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 TROVE2P10155 538 aaKnown RBP eCLIP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 ACP2P11117 423 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF182P17025 639 aaPredicted RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 EFNA1P20827 205 aaPredicted RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 IL12AP29459 219 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 IL12BP29460 328 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 MDH1P40925 334 aaKnown RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 TRPC1P48995 793 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 DNASE1L1P49184 302 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 ATP4BP51164 291 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 STX1BP61266 288 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 HBA1P69905 142 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 PMP22Q01453 160 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 SF3B4Q15427 424 aaKnown RBP eCLIP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 ADIPOQQ15848 244 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 FAM174BQ3ZCQ3 159 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 CMPK2Q5EBM0 449 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 SPANXN4Q5MJ08 99 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 PRAMEF20Q5VT98 475 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 AP1ARQ63HQ0 302 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 CLEC18BQ6UXF7 455 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 NPSR1Q6W5P4 371 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 Q6ZPB1 254 aaPredicted RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 C6orf120Q7Z4R8 191 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 PRR22Q8IZ63 422 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 EID3Q8N140 333 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 TMEM251Q8N6I4 163 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 TRIML2Q8N7C3 387 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 OR4A15Q8NGL6 344 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 OR1J4Q8NGS1 313 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 LILRB1Q8NHL6 650 aaPredicted RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 MIPOL1Q8TD10 442 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 RNF138Q8WVD3 245 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 C16orf58Q96GQ5 468 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 ITCHQ96J02 903 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF597Q96LX8 424 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 RILPQ96NA2 401 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 OR52E6Q96RD3 313 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 DOHHQ9BU89 302 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 OSBPL11Q9BXB4 747 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 C1QTNF5Q9BXJ0 243 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 TTTY12Q9BZ98 90 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 HOXD1Q9GZZ0 328 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 DEFB127Q9H1M4 99 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 RMND5AQ9H871 391 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 ZDHHC11Q9H8X9 412 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 PLSCR4Q9NRQ2 329 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 MRGBPQ9NV56 204 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 SELENONQ9NZV5 590 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 MRPS18CQ9Y3D5 142 aaKnown RBP2.22□□□□□ -2.05
VPS13A-208ENST00000423463 SNX8Q9Y5X2 465 aa2.22□□□□□ -2.05
VPS13A-208ENST00000423463 CEPT1Q9Y6K0 416 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms