RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 KCTD14Q9BQ13 255 aaPredicted RBP13.26□□□□□ -0.29
USB1-202ENST00000423271 REG4Q9BYZ8 158 aa13.26□□□□□ -0.29
USB1-202ENST00000423271 NELFAQ9H3P2 528 aa13.26□□□□□ -0.29
USB1-202ENST00000423271 SLC13A4Q9UKG4 626 aa13.26□□□□□ -0.29
USB1-202ENST00000423271 TRAV36DV7A0A075B6V5 113 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 A0A096LPE4 126 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 A0A0B4J2E0 115 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 IGHV1-18A0A0C4DH31 117 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 A0A1B0GX12 115 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 A0A1W2PPZ6 126 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 CXCR6O00574 342 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 GSTA4O15217 222 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 SSX4O60224 188 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 ZNF432O94892 652 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 UBOX5O94941 541 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 WNT11O96014 354 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 HPRP00739 348 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 ZNF43P17038 809 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 CALB2P22676 271 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 KDELR2P33947 212 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 ROR2Q01974 943 aaKnown RBP13.25□□□□□ -0.29
USB1-202ENST00000423271 OR1Q1Q15612 314 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 NRF1Q16656 503 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 ULK3Q6PHR2 472 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 C5orf46Q6UWT4 87 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 DEFB107AQ8IZN7 70 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 RBM15BQ8NDT2 890 aaKnown RBP13.25□□□□□ -0.29
USB1-202ENST00000423271 BCL2L2Q92843 193 aaPredicted RBP13.25□□□□□ -0.29
USB1-202ENST00000423271 SLC47A1Q96FL8 570 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 OXGR1Q96P68 337 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 CDRT15Q96T59 188 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 LINC00470Q9BZP3 86 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 BARX1Q9HBU1 254 aaPredicted RBP13.25□□□□□ -0.29
USB1-202ENST00000423271 NDE1Q9NXR1 346 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 MOKQ9UQ07 419 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 RCE1Q9Y256 329 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 ARFGEF3Q5TH69 2177 aa13.25□□□□□ -0.29
USB1-202ENST00000423271 IGHV4-30-2A0A087WSY4 118 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 A0A087WUJ7 227 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 OR6C65A6NJZ3 312 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 TRAF3IP2O43734 574 aaPredicted RBP13.24□□□□□ -0.29
USB1-202ENST00000423271 OR2T1O43869 369 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 BGLAPP02818 100 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 C8BP07358 591 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 NCK1P16333 377 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 CDH12P55289 794 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 IL1RL1Q01638 556 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 CYBRD1Q53TN4 286 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 HMBOX1Q6NT76 420 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 ZNF544Q6NX49 715 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 H1FNTQ75WM6 255 aaPredicted RBP13.24□□□□□ -0.29
USB1-202ENST00000423271 RBM45Q8IUH3 476 aaKnown RBP13.24□□□□□ -0.29
USB1-202ENST00000423271 FAM156AQ8NDB6 213 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 OR4D11Q8NGI4 311 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 VANGL1Q8TAA9 524 aaPredicted RBP13.24□□□□□ -0.29
USB1-202ENST00000423271 RASSF5Q8WWW0 418 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 ZNF837Q96EG3 531 aaPredicted RBP13.24□□□□□ -0.29
USB1-202ENST00000423271 ADAD1Q96M93 576 aaKnown RBP13.24□□□□□ -0.29
USB1-202ENST00000423271 SEC61A2Q9H9S3 476 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 FKRPQ9H9S5 495 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 TMEM27Q9HBJ8 222 aa13.24□□□□□ -0.29
USB1-202ENST00000423271 ARPC4-TTLL3A0A0A6YYG9 625 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 LRRN3E7EW58 273 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 SLC43A1O75387 559 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 IFNA14P01570 189 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 HLA-DOBP13765 273 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 TCN1P20061 433 aaPredicted RBP13.23□□□□□ -0.29
USB1-202ENST00000423271 TNFRSF1BP20333 461 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 NUDT6P53370 316 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 UBE2NP61088 152 aaKnown RBP13.23□□□□□ -0.29
USB1-202ENST00000423271 ARF1P84077 181 aaKnown RBP13.23□□□□□ -0.29
USB1-202ENST00000423271 C1DQ13901 141 aaKnown RBP13.23□□□□□ -0.29
USB1-202ENST00000423271 NPTX1Q15818 432 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 SAMD4BQ5PRF9 694 aaKnown RBP13.23□□□□□ -0.29
USB1-202ENST00000423271 PHYHD1Q5SRE7 291 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 C1QTNF12Q5T7M4 302 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 RANBP3LQ86VV4 465 aaPredicted RBP13.23□□□□□ -0.29
USB1-202ENST00000423271 PRIMA1Q86XR5 153 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 WDFY1Q8IWB7 410 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 TMEM123Q8N131 208 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 ADPRHL1Q8NDY3 354 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 OR6T1Q8NGN1 323 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 SLC41A3Q96GZ6 507 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 MOGAT1Q96PD6 335 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 SLC38A2Q96QD8 506 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 OR2M2Q96R28 347 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 EVA1AQ9H8M9 152 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 GPR35Q9HC97 309 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 OBP2BQ9NPH6 170 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 SELENONQ9NZV5 590 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 CD300AQ9UGN4 299 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 EGFL7Q9UHF1 273 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 BAG5Q9UL15 447 aa13.23□□□□□ -0.29
USB1-202ENST00000423271 ZNF503-AS2A6NEH8 195 aa13.22□□□□□ -0.29
USB1-202ENST00000423271 MS4A18H0YCH9 400 aa13.22□□□□□ -0.29
USB1-202ENST00000423271 RPL36A-HNRNPH2H7BZ11 118 aa13.22□□□□□ -0.29
USB1-202ENST00000423271 SEC14L2O76054 403 aa13.22□□□□□ -0.29
USB1-202ENST00000423271 HSD17B1P14061 328 aa13.22□□□□□ -0.29
USB1-202ENST00000423271 NQO1P15559 274 aaKnown RBP13.22□□□□□ -0.29
USB1-202ENST00000423271 MSX2P35548 267 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms