RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 FAHD1Q6P587 224 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 SMARCD3Q6STE5 483 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 CD300LDQ6UXZ3 194 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 ZNF808Q8N4W9 903 aaPredicted RBP15.07■□□□□ 0
COL7A1-202ENST00000422991 ICA1LQ8NDH6 482 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 SSC4DQ8WTU2 575 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 PIGMQ9H3S5 423 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 C12orf49Q9H741 205 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 RCE1Q9Y256 329 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 CDH10Q9Y6N8 788 aa15.07■□□□□ 0
COL7A1-202ENST00000422991 A0A1W2PRG6 482 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 WIPF3A6NGB9 483 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 NPIPB13A6NJU9 1138 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 NPIPB4C9JG80 1138 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 MCIDASD6RGH6 385 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 BAG2O95816 211 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 IGHMP01871 453 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 CD8BP10966 210 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 ANPEPP15144 967 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 IFNGR1P15260 489 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 EDNRAP25101 427 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 OR3A2P47893 321 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 CLDN17P56750 224 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 CDSNQ15517 529 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 TAF11Q15544 211 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 SLC25A35Q3KQZ1 300 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 ANKRD34AQ69YU3 496 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 XKRXQ6PP77 449 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 KLHL17Q6TDP4 642 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 CASP12Q6UXS9 341 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 TFAP2EQ6VUC0 442 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 THSD4Q6ZMP0 1018 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 RASSF6Q6ZTQ3 369 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 SLC35D2Q76EJ3 337 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 MRGPRGQ86SM5 289 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 STK32CQ86UX6 486 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 IGFN1Q86VF2 1251 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 KIF18BQ86Y91 864 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 ATG16L2Q8NAA4 619 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 GPX7Q96SL4 187 aaPredicted RBP15.06■□□□□ 0
COL7A1-202ENST00000422991 UCK2Q9BZX2 261 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 NDEL1Q9GZM8 345 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 ENKD1Q9H0I2 346 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 OR52D1Q9H346 318 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 PLSCR4Q9NRQ2 329 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 MED29Q9NX70 200 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 KIF17Q9P2E2 1029 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 PROCRQ9UNN8 238 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 FREM1Q5H8C1 2179 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 CACNA1CQ13936 2221 aa15.06■□□□□ 0
COL7A1-202ENST00000422991 SPTBN1Q01082 2364 aaKnown RBP15.06■□□□□ 0
COL7A1-202ENST00000422991 SPTAN1Q13813 2472 aaKnown RBP15.06■□□□□ 0
COL7A1-202ENST00000422991 UTP20O75691 2785 aaKnown RBP15.06■□□□□ 0
COL7A1-202ENST00000422991 AKAP8O43823 692 aaKnown RBP15.05■□□□□ -0
COL7A1-202ENST00000422991 MRPL33O75394 65 aaKnown RBP15.05■□□□□ -0
COL7A1-202ENST00000422991 ZNF432O94892 652 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 TP53P04637 393 aaPredicted RBP15.05■□□□□ -0
COL7A1-202ENST00000422991 RNF224P0DH78 156 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 DAPP51397 102 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 DAP3P51398 398 aaKnown RBP15.05■□□□□ -0
COL7A1-202ENST00000422991 COX10Q12887 443 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 ACKR1Q16570 336 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 AAED1Q7RTV5 226 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.05■□□□□ -0
COL7A1-202ENST00000422991 WDFY1Q8IWB7 410 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 CLDN22Q8N7P3 220 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 LILRB4Q8NHJ6 448 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 DNAJC9Q8WXX5 260 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 APH1AQ96BI3 265 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 TXNDC15Q96J42 360 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 OR2M2Q96R28 347 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 KATNB1Q9BVA0 655 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 OPN3Q9H1Y3 402 aaPredicted RBP15.05■□□□□ -0
COL7A1-202ENST00000422991 EGLN3Q9H6Z9 239 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 ZNF556Q9HAH1 456 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 PARPBPQ9NWS1 579 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 JKAMPQ9P055 326 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 IL20RAQ9UHF4 553 aa15.05■□□□□ -0
COL7A1-202ENST00000422991 FAM90A27PA6NNH2 459 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 EEF1E1-BLOC1S5C9J1V9 151 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 H0YHG0 523 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 MSTNO14793 375 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 EEF1E1O43324 174 aaKnown RBP15.04■□□□□ -0
COL7A1-202ENST00000422991 SMNDC1O75940 238 aaKnown RBP eCLIP15.04■□□□□ -0
COL7A1-202ENST00000422991 CD14P08571 375 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 SLC6A6P31641 620 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 RPL4P36578 427 aaKnown RBP15.04■□□□□ -0
COL7A1-202ENST00000422991 SELENOPP49908 381 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 BIDP55957 195 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 CTXN1P60606 82 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 MELKQ14680 651 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 RFX4Q33E94 735 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 RPL13AP3Q6NVV1 102 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 NIPAL3Q6P499 406 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 ZNF100Q8IYN0 542 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 TMEM123Q8N131 208 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 OR8D4Q8NGM9 314 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 CA5BP1Q8WTZ4 195 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 ASB10Q8WXI3 467 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 SAMD8Q96LT4 415 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms