RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 PNPLA3Q9NST1 481 aa19.22■□□□□ 0.67
ABCF3-202ENST00000421340 MGAQ8IWI9 3026 aa19.22■□□□□ 0.67
ABCF3-202ENST00000421340 SH3D21A4FU49 640 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 NPIPA2E9PIF3 369 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 NPIPA3F8WFD2 350 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 RAMP1O60894 148 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 HLA-DOBP13765 273 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 HIST1H1CP16403 213 aaKnown RBP19.21■□□□□ 0.67
ABCF3-202ENST00000421340 ZNF3P17036 446 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 PTGS2P35354 604 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 POU3F1Q03052 451 aaPredicted RBP19.21■□□□□ 0.67
ABCF3-202ENST00000421340 SLC35F1Q5T1Q4 408 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 GTF2IRD2BQ6EKJ0 949 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 CREB3L2Q70SY1 520 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 ADCK1Q86TW2 530 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 GTF2IRD2Q86UP8 949 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 OR9K2Q8NGE7 335 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 RNF128Q8TEB7 428 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 ADAD1Q96M93 576 aaKnown RBP19.21■□□□□ 0.67
ABCF3-202ENST00000421340 NR1H4Q96RI1 486 aaPredicted RBP19.21■□□□□ 0.67
ABCF3-202ENST00000421340 TUBA1CQ9BQE3 449 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 GP6Q9HCN6 339 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 RASSF1Q9NS23 344 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 CLN6Q9NWW5 311 aa19.21■□□□□ 0.67
ABCF3-202ENST00000421340 IGKV3D-15A0A087WSY6 115 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 IGHV3-15A0A0B4J1V0 119 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 TEX13CA0A0J9YWL9 993 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 ZNF716A6NP11 495 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 CENPBD1B2RD01 187 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 TRAF3IP2O43734 574 aaPredicted RBP19.2■□□□□ 0.66
ABCF3-202ENST00000421340 HOXD4P09016 255 aaPredicted RBP19.2■□□□□ 0.66
ABCF3-202ENST00000421340 FCGR2AP12318 317 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 IFNGR1P15260 489 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 KLK2P20151 261 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 PTGER4P35408 488 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.2■□□□□ 0.66
ABCF3-202ENST00000421340 ITGADQ13349 1161 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 PON3Q15166 354 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 RNPS1Q15287 305 aaKnown RBP19.2■□□□□ 0.66
ABCF3-202ENST00000421340 ST3GAL2Q16842 350 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 C6orf141Q5SZD1 244 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 FGD2Q7Z6J4 655 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 GPAT4Q86UL3 456 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 LSM14AQ8ND56 463 aaKnown RBP19.2■□□□□ 0.66
ABCF3-202ENST00000421340 NPEPL1Q8NDH3 523 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 OR52E2Q8NGJ4 325 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 OR6X1Q8NH79 312 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 APH1BQ8WW43 257 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 ASB10Q8WXI3 467 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 ROBO4Q8WZ75 1007 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 HDAC2Q92769 488 aaKnown RBP19.2■□□□□ 0.66
ABCF3-202ENST00000421340 IL4I1Q96RQ9 567 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 TNFRSF10DQ9UBN6 386 aa19.2■□□□□ 0.66
ABCF3-202ENST00000421340 CLCA1A8K7I4 914 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 XKRYO14609 159 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 GPR171O14626 319 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 WBP4O75554 376 aaKnown RBP19.19■□□□□ 0.66
ABCF3-202ENST00000421340 SLC2A10O95528 541 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 PLGP00747 810 aaPredicted RBP19.19■□□□□ 0.66
ABCF3-202ENST00000421340 GABRA1P14867 456 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 PAICSP22234 425 aaKnown RBP19.19■□□□□ 0.66
ABCF3-202ENST00000421340 ACVR1BP36896 505 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 RASGEF1BQ0VAM2 473 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 TOP3AQ13472 1001 aaPredicted RBP19.19■□□□□ 0.66
ABCF3-202ENST00000421340 KRR1Q13601 381 aaKnown RBP19.19■□□□□ 0.66
ABCF3-202ENST00000421340 AADACL4Q5VUY2 407 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 UGT2A3Q6UWM9 527 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 JAZF1Q86VZ6 243 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 SLC37A3Q8NCC5 494 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 OR4K13Q8NH42 304 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 PRRG4Q9BZD6 226 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 CALHM2Q9HA72 323 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 PLCXD1Q9NUJ7 323 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 KLHL9Q9P2J3 617 aa19.19■□□□□ 0.66
ABCF3-202ENST00000421340 SNTNA6NMZ2 147 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 ZNF724A8MTY0 619 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 KDM4EB2RXH2 506 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-202ENST00000421340 PRR23D1E9PI22 279 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-202ENST00000421340 AKAP8O43823 692 aaKnown RBP19.18■□□□□ 0.66
ABCF3-202ENST00000421340 PRR23D2P0DMB1 279 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-202ENST00000421340 ACVR2AP27037 513 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 CDKN2AP42771 156 aaKnown RBP19.18■□□□□ 0.66
ABCF3-202ENST00000421340 SLC25A1P53007 311 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 LY6DQ14210 128 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 C3AR1Q16581 482 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 MESTQ5EB52 335 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 RBM48Q5RL73 367 aaKnown RBP19.18■□□□□ 0.66
ABCF3-202ENST00000421340 NXNL2Q5VZ03 156 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 LAIR2Q6ISS4 152 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 ZIC4Q8N9L1 334 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 PTP4A1Q93096 173 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 ZNF566Q969W8 418 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 RASD2Q96D21 266 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 TXNDC15Q96J42 360 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 LRR1Q96L50 414 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 NMNAT2Q9BZQ4 307 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 BCO1Q9HAY6 547 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 GLRX2Q9NS18 164 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 ASF1BQ9NVP2 202 aa19.18■□□□□ 0.66
ABCF3-202ENST00000421340 VSX1Q9NZR4 365 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms