RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 CEP85LQ5SZL2 805 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 RNF220Q5VTB9 566 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 OGFOD2Q6N063 350 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 PAQR4Q8N4S7 273 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-203ENST00000420503 OR9I1Q8NGQ6 314 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 STK35Q8TDR2 534 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 OXGR1Q96P68 337 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 ESM1Q9NQ30 184 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 P2RX2Q9UBL9 471 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 CMAHPQ9Y471 501 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 PCDHB14Q9Y5E9 798 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 PKD1L1Q8TDX9 2849 aa11.04□□□□□ -0.64
LINC00339-203ENST00000420503 A0A1B0GWA3 101 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 TMEM89A2RUT3 159 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 ZNF99A8MXY4 864 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-203ENST00000420503 MS4A18H0YCH9 400 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 RFXANKO14593 260 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 RGS16O15492 202 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-203ENST00000420503 SYNGR3O43761 229 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 CDC14BO60729 498 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 FZD7O75084 574 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 SERPINI2O75830 405 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 CLPTM1O96005 669 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 ERCC1P07992 297 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-203ENST00000420503 GIPRP48546 466 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 PTDSS1P48651 473 aaKnown RBP11.03□□□□□ -0.64
LINC00339-203ENST00000420503 BST1Q10588 318 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 MFSD13AQ14CX5 517 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 DPY19L1Q2PZI1 675 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 MS4A18Q3C1V0 323 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 FAHD2BQ6P2I3 314 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-203ENST00000420503 NHLRC1Q6VVB1 395 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 CROCCP2Q86T23 111 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 PEG10Q86TG7 708 aaKnown RBP11.03□□□□□ -0.64
LINC00339-203ENST00000420503 ZNF584Q8IVC4 421 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 C20orf196Q8IYI0 205 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 TRIML2Q8N7C3 387 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 TAF15Q92804 592 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00339-203ENST00000420503 FAHD2AQ96GK7 314 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 MOGAT1Q96PD6 335 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 ZNF317Q96PQ6 595 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-203ENST00000420503 SPATA9Q9BWV2 254 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 C1QTNF5Q9BXJ0 243 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 OR51B6Q9H340 312 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 KLHL14Q9P2G3 628 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 HAO1Q9UJM8 370 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 USP22Q9UPT9 525 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 CACNG2Q9Y698 323 aa11.03□□□□□ -0.64
LINC00339-203ENST00000420503 TRRAPQ9Y4A5 3859 aa11.02□□□□□ -0.64
LINC00339-203ENST00000420503 PPIHO43447 177 aaKnown RBP11.02□□□□□ -0.65
LINC00339-203ENST00000420503 TPST1O60507 370 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 CCL2P13500 99 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 HOXB1P14653 301 aaPredicted RBP11.02□□□□□ -0.65
LINC00339-203ENST00000420503 EPHA1P21709 976 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 COMPP49747 757 aaPredicted RBP11.02□□□□□ -0.65
LINC00339-203ENST00000420503 CRISP3P54108 245 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 HILS1P60008 231 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 MVKQ03426 396 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 CAMK2DQ13557 499 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 RAB39AQ14964 217 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 FXNQ16595 210 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 GSG1Q2KHT4 349 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 ZNF311Q5JNZ3 666 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 SHQ1Q6PI26 577 aaKnown RBP11.02□□□□□ -0.65
LINC00339-203ENST00000420503 ZNF813Q6ZN06 617 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 MAVSQ7Z434 540 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 HOMEZQ8IX15 550 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 C3orf56Q8N813 242 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 GCDHQ92947 438 aaPredicted RBP11.02□□□□□ -0.65
LINC00339-203ENST00000420503 SLC6A7Q99884 636 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 TPT1P8Q9HAU6 139 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 SSU72Q9NP77 194 aaKnown RBP11.02□□□□□ -0.65
LINC00339-203ENST00000420503 G6PC2Q9NQR9 355 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 DUSP13Q9UII6 198 aa11.02□□□□□ -0.65
LINC00339-203ENST00000420503 A0A096LPI6 279 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 AIM2O14862 343 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 KRT75O95678 551 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 FAM157BP0CG42 384 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 KITP10721 976 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 ACHEP22303 614 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 GTF2E2P29084 291 aaKnown RBP11.01□□□□□ -0.65
LINC00339-203ENST00000420503 ANXA11P50995 505 aaKnown RBP11.01□□□□□ -0.65
LINC00339-203ENST00000420503 POU3F1Q03052 451 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-203ENST00000420503 LARS2Q15031 903 aaKnown RBP11.01□□□□□ -0.65
LINC00339-203ENST00000420503 TMEM255AQ5JRV8 349 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 C6orf89Q6UWU4 347 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 WDR88Q6ZMY6 472 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 H1FNTQ75WM6 255 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-203ENST00000420503 PIK3C3Q8NEB9 887 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 RDH5Q92781 318 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 TMPRSS13Q9BYE2 586 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 FBXO9Q9UK97 447 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-203ENST00000420503 PCDHB10Q9UN67 800 aa11.01□□□□□ -0.65
LINC00339-203ENST00000420503 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-203ENST00000420503 A0A087WUJ7 227 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 A0A1W2PPW3 197 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 BIRC5O15392 142 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 PLPP2O43688 288 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 TPST2O60704 377 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms