RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 ADGRG3Q86Y34 549 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 OR10AC1Q8NH08 325 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 HAVCR1Q96D42 359 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 RPP25Q9BUL9 199 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 ING1Q9UK53 422 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 ZNF337Q9Y3M9 751 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 A0A0A6YYC8 382 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 PLSCR5A0PG75 271 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 ELOA3DA6NLF2 546 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 I3L1I5 382 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 LGALS8O00214 317 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 RBBP9O75884 186 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 GLCEO94923 617 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 GIPP09681 153 aaPredicted RBP13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 RAB40ALP0C0E4 278 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 PBX2P40425 430 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 LTBQ06643 244 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 ILF3Q12906 894 aaKnown RBP eCLIP13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 ELOA3BQ3SY89 546 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 Q499Y3 187 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 ELFN2Q5R3F8 820 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 POMZP3Q6PJE2 187 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 ELOA3Q8NG57 546 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 OR6N2Q8NGY6 317 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 TNFAIP8L1Q8WVP5 186 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 RAB40AQ8WXH6 277 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 CTHRC1Q96CG8 243 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 SMAD9O15198 467 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 TNFSF14O43557 240 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 TACSTD2P09758 323 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 NAT2P11245 290 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 CTXN1P60606 82 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 NFATC4Q14934 902 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 EXOSC6Q5RKV6 272 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 HDDC2Q7Z4H3 204 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 PRSS42Q7Z5A4 293 aa13.84□□□□□ -0.19
SEMA3B-203ENST00000419007 TRAV8-7A0A075B6U6 113 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 MCRIP1C9JLW8 97 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 ZNF749O43361 778 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 SLC35E2P0CK97 266 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 NUP62P37198 522 aaPredicted RBP13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 CENPAP49450 140 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 MAT1AQ00266 395 aaKnown RBP13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 GUCA2AQ02747 115 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 TMEM196Q5HYL7 178 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 GLB1L2Q8IW92 636 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 DND1Q8IYX4 353 aaKnown RBP13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 LSM14AQ8ND56 463 aaKnown RBP13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 OR4D10Q8NGI6 311 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 OR51A4Q8NGJ6 313 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 PHYHIPQ92561 330 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 TMEM106AQ96A25 262 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 MIB2Q96AX9 1013 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 CMTM3Q96MX0 182 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 FOXN4Q96NZ1 517 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 MTIF3Q9H2K0 278 aaKnown RBP13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 KCNK15Q9H427 330 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 Q9N2J8 555 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 C12orf4Q9NQ89 552 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 POLE3Q9NRF9 147 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 FRRS1LQ9P0K9 344 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 SESN1Q9Y6P5 492 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 A0A087WUJ7 227 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 C2orf74A8MZ97 194 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 GOSR2O14653 212 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 PPM1BO75688 479 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 NDUFB6O95139 128 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 GPANK1O95872 356 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 ZNF35P13682 527 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 HPGDP15428 266 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 MAZP56270 477 aaKnown RBP13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 NHLRC3Q5JS37 347 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 ZNF626Q68DY1 528 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 GRAMD2AQ8IUY3 354 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 METTL27Q8N6F8 245 aaPredicted RBP13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 BAHD1Q8TBE0 780 aaPredicted RBP13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 SP7Q8TDD2 431 aaPredicted RBP13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 MFRPQ9BY79 579 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 ZC4H2Q9NQZ6 224 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 LAMP5Q9UJQ1 280 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 TICRRQ7Z2Z1 1910 aa13.83□□□□□ -0.2
SEMA3B-203ENST00000419007 DCTN6O00399 190 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 RP2O75695 350 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 HOXB2P14652 356 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 ALKBH1Q13686 389 aaKnown RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 C2orf68Q2NKX9 166 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 TUSC1Q2TAM9 212 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 KIAA1324Q6UXG2 1013 aaKnown RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 ZBTB44Q8NCP5 570 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 OR51D1Q8NGF3 324 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 NSMAFQ92636 917 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 DVL3Q92997 716 aaPredicted RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 MOGAT1Q96PD6 335 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 MS4A7Q9GZW8 240 aaPredicted RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 GDE1Q9NZC3 331 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 MRM2Q9UI43 246 aaKnown RBP13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 SULT1B1O43704 296 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 SUSD5O60279 629 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 VSIG10L2P0DP72 767 aa13.82□□□□□ -0.2
SEMA3B-203ENST00000419007 GTF2F2P13984 249 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms