RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 KATNB1Q9BVA0 655 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 SFXN3Q9BWM7 321 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 TSSK6Q9BXA6 273 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 RNF122Q9H9V4 155 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 GP6Q9HCN6 339 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 SIGLEC7Q9Y286 467 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 COL6A6A6NMZ7 2263 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 A6NIZ1 184 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 RIIAD1A6NNX1 92 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF724A8MTY0 619 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 KDM4EB2RXH2 506 aaPredicted RBP7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF814B7Z6K7 855 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 MS4A18H0YCH9 400 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 RAMP1O60894 148 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 RENP00797 406 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 IFNGP01579 166 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 CRHP06850 196 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 CD14P08571 375 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 IFNGR1P15260 489 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 KLK2P20151 261 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 BMP5P22003 454 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 AGTR1P30556 359 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 UQCRC1P31930 480 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ACVR1BP36896 505 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 DAPP51397 102 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 SLC16A1P53985 500 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 RAP1BP61224 184 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 RPL27P61353 136 aaKnown RBP7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ESRRGP62508 458 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 RAP1AP62834 184 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ERVK-25P63136 954 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 H3F3AP84243 136 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 CD47Q08722 323 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ITGADQ13349 1161 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 SLC17A1Q14916 467 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 POU4F3Q15319 338 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 MS4A18Q3C1V0 323 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ZIK1Q3SY52 487 aaPredicted RBP7.53□□□□□ -1.2
TRIM48-201ENST00000417545 FAM205BPQ63HN1 556 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 GPR139Q6DWJ6 353 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 RTL6Q6ICC9 239 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF770Q6IQ21 691 aaPredicted RBP7.53□□□□□ -1.2
TRIM48-201ENST00000417545 SLC27A4Q6P1M0 643 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 FAHD1Q6P587 224 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 DPY19L2P2Q6ZN68 376 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 CREB3L2Q70SY1 520 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ABHD12BQ7Z5M8 362 aaPredicted RBP7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ADGRE4PQ86SQ3 457 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 EPHX4Q8IUS5 362 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 RPRMLQ8N4K4 120 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 PACRGLQ8N7B6 248 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 CLDN22Q8N7P3 220 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 OR2T33Q8NG76 320 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 OR6K3Q8NGY3 331 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 OTULINQ96BN8 352 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ADAD1Q96M93 576 aaKnown RBP7.53□□□□□ -1.2
TRIM48-201ENST00000417545 SLC38A2Q96QD8 506 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 TXNIPQ9H3M7 391 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 MCCC2Q9HCC0 563 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ASB6Q9NWX5 421 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 MED29Q9NX70 200 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 TAS2R5Q9NYW4 299 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 NKX1-2Q9UD57 310 aaPredicted RBP7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ERRFI1Q9UJM3 462 aaPredicted RBP7.53□□□□□ -1.2
TRIM48-201ENST00000417545 BAIAP2Q9UQB8 552 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 SLC5A6Q9Y289 635 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 IER3IP1Q9Y5U9 82 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 FLVCR1Q9Y5Y0 555 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 DOCK7Q96N67 2140 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 TLN1Q9Y490 2541 aaKnown RBP7.53□□□□□ -1.2
TRIM48-201ENST00000417545 BSNQ9UPA5 3926 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 ATRXP46100 2492 aa7.53□□□□□ -1.2
TRIM48-201ENST00000417545 A0A0G2JNJ9 132 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 TEX13CA0A0J9YWL9 993 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 SLC35F4A4IF30 521 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 OR6C65A6NJZ3 312 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 FAM90A27PA6NNH2 459 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF716A6NP11 495 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 PYCARD-AS1I3L0S3 204 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 SOCS2O14508 198 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 ARHGEF9O43307 516 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 KLF4O43474 513 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 MITFO75030 526 aaPredicted RBP7.52□□□□□ -1.2
TRIM48-201ENST00000417545 AGFG2O95081 481 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 IGHG1P01857 330 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 HLA-DOBP13765 273 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF3P17036 446 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 PAICSP22234 425 aaKnown RBP7.52□□□□□ -1.2
TRIM48-201ENST00000417545 CHRNB4P30926 498 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 GUCA1AP43080 201 aaPredicted RBP7.52□□□□□ -1.2
TRIM48-201ENST00000417545 CSNK1A1P48729 337 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 CRISP1P54107 249 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 RPS4XP62701 263 aaKnown RBP7.52□□□□□ -1.2
TRIM48-201ENST00000417545 CAMK2DQ13557 499 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 KRR1Q13601 381 aaKnown RBP7.52□□□□□ -1.2
TRIM48-201ENST00000417545 SNCBQ16143 134 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 ACKR1Q16570 336 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 SLC35F1Q5T1Q4 408 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 KDM4DQ6B0I6 523 aa7.52□□□□□ -1.2
TRIM48-201ENST00000417545 CD300LDQ6UXZ3 194 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms