RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 TSPAN32Q96QS1 320 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 TACO1Q9BSH4 297 aaKnown RBP7.17□□□□□ -1.26
MDC1-203ENST00000417033 NAA11Q9BSU3 229 aaPredicted RBP7.17□□□□□ -1.26
MDC1-203ENST00000417033 EMC6Q9BV81 110 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 KATNB1Q9BVA0 655 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 TSSK6Q9BXA6 273 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 GABARAPL3Q9BY60 117 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 PRRG4Q9BZD6 226 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 RNF122Q9H9V4 155 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 CALHM2Q9HA72 323 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 ZNF556Q9HAH1 456 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 INIPQ9NRY2 104 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 MCTS1Q9ULC4 181 aaKnown RBP7.17□□□□□ -1.26
MDC1-203ENST00000417033 B3GALT5Q9Y2C3 310 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 ZNF175Q9Y473 711 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 IER3IP1Q9Y5U9 82 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 FLVCR1Q9Y5Y0 555 aa7.17□□□□□ -1.26
MDC1-203ENST00000417033 TEX13CA0A0J9YWL9 993 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 MBD3L4A6NDZ8 208 aaPredicted RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 MBD3L3A6NE82 208 aaPredicted RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 MBD3L5A6NJ08 208 aaPredicted RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 CD8B2A6NJW9 211 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 FIGNL2A6NMB9 653 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 ZAR1LA6NP61 321 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 AHRRA9YTQ3 701 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 PRRG2O14669 202 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 DNPH1O43598 174 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 EIF1BO60739 113 aaKnown RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 WDR1O75083 606 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 OR6A2O95222 327 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 CLIC3O95833 236 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 CD14P08571 375 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 GLI4P10075 376 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 GSTM3P21266 225 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 SLC6A6P31641 620 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 RPL4P36578 427 aaKnown RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 CA7P43166 264 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 SLC16A1P53985 500 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 CRISP1P54107 249 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 BIDP55957 195 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 CLDN17P56750 224 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 RBPJQ06330 500 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 ZP4Q12836 540 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 C1DQ13901 141 aaKnown RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 GINS1Q14691 196 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 GUSBP1Q15486 140 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 SNCBQ16143 134 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 EIF2S3LQ2VIR3 472 aaKnown RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 PGGHGQ32M88 737 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 MESTQ5EB52 335 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 PHYHD1Q5SRE7 291 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 SLC35F1Q5T1Q4 408 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 CARD17Q5XLA6 110 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 TMEM225Q6GV28 225 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 VWA1Q6PCB0 445 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 IZUMO2Q6UXV1 221 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 B3GNT6Q6ZMB0 384 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 PTCHD4Q6ZW05 846 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 CREB3L2Q70SY1 520 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 SLC35D2Q76EJ3 337 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 FAM122BQ7Z309 247 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 UEVLDQ8IX04 471 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 PARP8Q8N3A8 854 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 MBD3L2Q8NHZ7 208 aaPredicted RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 ZNF519Q8TB69 540 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 TEX47Q8TBZ9 253 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 ASB10Q8WXI3 467 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 HDAC2Q92769 488 aaKnown RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 UBE2FQ969M7 185 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 INTS12Q96CB8 462 aaKnown RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 OXGR1Q96P68 337 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 ERMAPQ96PL5 475 aaPredicted RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 DMRTA2Q96SC8 542 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 GPX7Q96SL4 187 aaPredicted RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 TTYH2Q9BSA4 534 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 IFT27Q9BW83 186 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 POLDIP3Q9BY77 421 aaKnown RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 TP63Q9H3D4 680 aaPredicted RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 FN3KQ9H479 309 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 NRIP3Q9NQ35 241 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 TIGARQ9NQ88 270 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 SMPD3Q9NY59 655 aaPredicted RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 IL20Q9NYY1 176 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 AASSQ9UDR5 926 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 ZNF346Q9UL40 294 aaKnown RBP7.16□□□□□ -1.26
MDC1-203ENST00000417033 RASD1Q9Y272 281 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 MED12LQ86YW9 2145 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 ATMQ13315 3056 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 BSNQ9UPA5 3926 aa7.16□□□□□ -1.26
MDC1-203ENST00000417033 DOCK7Q96N67 2140 aa7.15□□□□□ -1.26
MDC1-203ENST00000417033 IGKV3D-15A0A087WSY6 115 aa7.15□□□□□ -1.26
MDC1-203ENST00000417033 IGKV1D-43A0A0B4J1Z2 117 aa7.15□□□□□ -1.26
MDC1-203ENST00000417033 SLC35F4A4IF30 521 aa7.15□□□□□ -1.26
MDC1-203ENST00000417033 HTR3EA5X5Y0 456 aa7.15□□□□□ -1.26
MDC1-203ENST00000417033 RCBTB2O95199 551 aa7.15□□□□□ -1.26
MDC1-203ENST00000417033 IGHV3-9P01782 118 aa7.15□□□□□ -1.26
MDC1-203ENST00000417033 IGHMP01871 453 aa7.15□□□□□ -1.26
MDC1-203ENST00000417033 STSP08842 583 aa7.15□□□□□ -1.26
MDC1-203ENST00000417033 GABRA1P14867 456 aa7.15□□□□□ -1.26
MDC1-203ENST00000417033 HIST1H1CP16403 213 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms