RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 ZPLD1Q8TCW7 415 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 ROBO4Q8WZ75 1007 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 SNRNP40Q96DI7 357 aaKnown RBP7.51□□□□□ -1.21
RBM39-208ENST00000416108 Q96M85 177 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 TSPAN32Q96QS1 320 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 UCN2Q96RP3 112 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 TRIB1Q96RU8 372 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 TUBA1CQ9BQE3 449 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 FANCFQ9NPI8 374 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 RASSF1Q9NS23 344 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 PNPLA3Q9NST1 481 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 ASF1BQ9NVP2 202 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 EMC3Q9P0I2 261 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 ZNF346Q9UL40 294 aaKnown RBP7.51□□□□□ -1.21
RBM39-208ENST00000416108 BLOC1S6Q9UL45 172 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 ADAM18Q9Y3Q7 739 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 ZNF175Q9Y473 711 aa7.51□□□□□ -1.21
RBM39-208ENST00000416108 LOC102725191A0A1B0GVB3 256 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 TLX2O43763 284 aaPredicted RBP7.5□□□□□ -1.21
RBM39-208ENST00000416108 CYTIPO60759 359 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 FAM20BO75063 409 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 TXNDC12O95881 172 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 GNAO1P09471 354 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 EDN3P14138 238 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 PTGER4P35408 488 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 TDGF1P3P51864 188 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 CASP6P55212 293 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 BIDP55957 195 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 CLDN17P56750 224 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 CLRN1P58418 232 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 H3F3AP84243 136 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 LGALS3BPQ08380 585 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 CD47Q08722 323 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 NFATC3Q12968 1075 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 ITGADQ13349 1161 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 FHL1Q13642 323 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 MAD2L1BPQ15013 274 aaPredicted RBP7.5□□□□□ -1.21
RBM39-208ENST00000416108 PDK3Q15120 406 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 POU4F3Q15319 338 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 TMEM201Q5SNT2 666 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 NIPAL3Q6P499 406 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 LEG1Q6P5S2 330 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 DNM1P34Q6PK57 102 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 USP51Q70EK9 711 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 CXXC5Q7LFL8 322 aaKnown RBP7.5□□□□□ -1.21
RBM39-208ENST00000416108 ADCK1Q86TW2 530 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 CD163Q86VB7 1156 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 GID4Q8IVV7 300 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 ENTHD1Q8IYW4 607 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 ZNF786Q8N393 782 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 MARVELD2Q8N4S9 558 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 ARIH2OSQ8N7S6 290 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 SDR9C7Q8NEX9 313 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 OR9K2Q8NGE7 335 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 OR5M9Q8NGP3 310 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 OR4K13Q8NH42 304 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 FNDC9Q8TBE3 224 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 FAM57AQ8TBR7 257 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 TMEM163Q8TC26 289 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 FNDC8Q8TC99 324 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 RNF128Q8TEB7 428 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 ASB10Q8WXI3 467 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 RFKQ969G6 155 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 RASD2Q96D21 266 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 ADAD1Q96M93 576 aaKnown RBP7.5□□□□□ -1.21
RBM39-208ENST00000416108 IL4I1Q96RQ9 567 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 SLX1AQ9BQ83 275 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 ENKD1Q9H0I2 346 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 FN3KQ9H479 309 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 CMC2Q9NRP2 79 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 GLRX2Q9NS18 164 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 MED29Q9NX70 200 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 SCN3BQ9NY72 215 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 RNF6Q9Y252 685 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 INTS1Q8N201 2190 aaKnown RBP7.5□□□□□ -1.21
RBM39-208ENST00000416108 SHANK1Q9Y566 2161 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 ACACBO00763 2458 aa7.5□□□□□ -1.21
RBM39-208ENST00000416108 FREM1Q5H8C1 2179 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 ZNF814B7Z6K7 855 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 M0R129 80 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 TRAF3IP2O43734 574 aaPredicted RBP7.49□□□□□ -1.21
RBM39-208ENST00000416108 PRKYO43930 277 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 RAMP1O60894 148 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 SLC43A1O75387 559 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 IGHG1P01857 330 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 HOXD4P09016 255 aaPredicted RBP7.49□□□□□ -1.21
RBM39-208ENST00000416108 HIST1H1CP16403 213 aaKnown RBP7.49□□□□□ -1.21
RBM39-208ENST00000416108 P2RY4P51582 365 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 SLC16A1P53985 500 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 CDH11P55287 796 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 PER3P56645 1201 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 ISL1P61371 349 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 RPS7P62081 194 aaKnown RBP7.49□□□□□ -1.21
RBM39-208ENST00000416108 SNRPGP62308 76 aaKnown RBP7.49□□□□□ -1.21
RBM39-208ENST00000416108 CSNK2BP67870 215 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 TEKQ02763 1124 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 CAMK2DQ13557 499 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 CRMP1Q14194 572 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 SLC17A1Q14916 467 aa7.49□□□□□ -1.21
RBM39-208ENST00000416108 KLHL12Q53G59 568 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms