RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 SLC35D2Q76EJ3 337 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 SLC43A2Q8N370 569 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 PACRGLQ8N7B6 248 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 CLDN22Q8N7P3 220 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 NAXEQ8NCW5 288 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 GALNT11Q8NCW6 608 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 ANKK1Q8NFD2 765 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 MBD3L2Q8NHZ7 208 aaPredicted RBP11.66□□□□□ -0.54
CNOT4-204ENST00000414802 TTYH2Q9BSA4 534 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 EMC6Q9BV81 110 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 GABARAPL3Q9BY60 117 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 SMPD3Q9NY59 655 aaPredicted RBP11.66□□□□□ -0.54
CNOT4-204ENST00000414802 IL20Q9NYY1 176 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 KLHL9Q9P2J3 617 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 IER3IP1Q9Y5U9 82 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 FLNCQ14315 2725 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 PRR14LQ5THK1 2151 aa11.66□□□□□ -0.54
CNOT4-204ENST00000414802 TEX13CA0A0J9YWL9 993 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 A0A1W2PRG6 482 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 VAMP5O95183 116 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 CD14P08571 375 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 EDNRAP25101 427 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 AGTR1P30556 359 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 SLC16A1P53985 500 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 RAD23AP54725 363 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 CASP6P55212 293 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 BIDP55957 195 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 PER3P56645 1201 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 PMPCAQ10713 525 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 FOXF2Q12947 444 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 NPRL3Q12980 569 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 GINS1Q14691 196 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 RNPS1Q15287 305 aaKnown RBP11.65□□□□□ -0.54
CNOT4-204ENST00000414802 POU4F3Q15319 338 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 SF3B4Q15427 424 aaKnown RBP eCLIP11.65□□□□□ -0.543e-6■■■■□ 24
CNOT4-204ENST00000414802 PGGHGQ32M88 737 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 SLC35F1Q5T1Q4 408 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 RPL13AP3Q6NVV1 102 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 CREB3L2Q70SY1 520 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 PXKQ7Z7A4 578 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 ZIC4Q8N9L1 334 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 Q96M85 177 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 ERMAPQ96PL5 475 aaPredicted RBP11.65□□□□□ -0.54
CNOT4-204ENST00000414802 GPX7Q96SL4 187 aaPredicted RBP11.65□□□□□ -0.54
CNOT4-204ENST00000414802 TACO1Q9BSH4 297 aaKnown RBP11.65□□□□□ -0.54
CNOT4-204ENST00000414802 NDEL1Q9GZM8 345 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 VCXQ9H320 206 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 ZNF346Q9UL40 294 aaKnown RBP11.65□□□□□ -0.54
CNOT4-204ENST00000414802 NOX1Q9Y5S8 564 aa11.65□□□□□ -0.54
CNOT4-204ENST00000414802 IGKV3D-15A0A087WSY6 115 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 H7C1C5 153 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 BHLHE40O14503 412 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 HOXD4P09016 255 aaPredicted RBP11.65□□□□□ -0.55
CNOT4-204ENST00000414802 TMIGD3P0DMS9 266 aaPredicted RBP11.65□□□□□ -0.55
CNOT4-204ENST00000414802 CDH2P19022 906 aaPredicted RBP11.65□□□□□ -0.55
CNOT4-204ENST00000414802 NTF4P34130 210 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 VHLP40337 213 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 LCN6P62502 163 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 ESRRGP62508 458 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 PTGES3Q15185 160 aaKnown RBP11.65□□□□□ -0.55
CNOT4-204ENST00000414802 TAF11Q15544 211 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 CARD17Q5XLA6 110 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 ACSM5Q6NUN0 579 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 NIPAL3Q6P499 406 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 VWA1Q6PCB0 445 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 CASP12Q6UXS9 341 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 IZUMO2Q6UXV1 221 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 NHLRC1Q6VVB1 395 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 DPY19L2P2Q6ZN68 376 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 FAM122BQ7Z309 247 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 NUFIP2Q7Z417 695 aaKnown RBP11.65□□□□□ -0.55
CNOT4-204ENST00000414802 FJX1Q86VR8 437 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 CNEP1R1Q8N9A8 125 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 PRR7Q8TB68 274 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 CYGBQ8WWM9 190 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 ASB10Q8WXI3 467 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 TM9SF2Q99805 663 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 SF3B5Q9BWJ5 86 aaKnown RBP11.65□□□□□ -0.55
CNOT4-204ENST00000414802 TXNIPQ9H3M7 391 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 C12orf49Q9H741 205 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 FANCFQ9NPI8 374 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 NRIP3Q9NQ35 241 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 EMC3Q9P0I2 261 aa11.65□□□□□ -0.55
CNOT4-204ENST00000414802 SLC35F4A4IF30 521 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 CCL21O00585 134 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 IMPA2O14732 288 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 SS18L1O75177 396 aaPredicted RBP11.64□□□□□ -0.55
CNOT4-204ENST00000414802 SLC2A10O95528 541 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 IGHMP01871 453 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 STSP08842 583 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 ACVR1BP36896 505 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 SELENOPP49908 381 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 RPL27P61353 136 aaKnown RBP11.64□□□□□ -0.55
CNOT4-204ENST00000414802 RUNX1T1Q06455 604 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 LGALS3BPQ08380 585 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 DBPQ10586 325 aaPredicted RBP11.64□□□□□ -0.55
CNOT4-204ENST00000414802 CAMK2DQ13557 499 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 KRR1Q13601 381 aaKnown RBP11.64□□□□□ -0.55
CNOT4-204ENST00000414802 PDK3Q15120 406 aa11.64□□□□□ -0.55
CNOT4-204ENST00000414802 MESTQ5EB52 335 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms