RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 GTDC1Q4AE62 458 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 LRP11Q86VZ4 500 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 KIRREL3Q8IZU9 778 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 LSMEM1Q8N8F7 131 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 GLB1L3Q8NCI6 653 aaPredicted RBP10.43□□□□□ -0.74
LIMS2-210ENST00000413578 OR51F2Q8NH61 342 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 VPS33AQ96AX1 596 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 LRR1Q96L50 414 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 SYT3Q9BQG1 590 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 TMEM109Q9BVC6 243 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 LPAR2Q9HBW0 351 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 ZNF275Q9NSD4 429 aaPredicted RBP10.43□□□□□ -0.74
LIMS2-210ENST00000413578 PNPOQ9NVS9 261 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 TREM2Q9NZC2 230 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 IFT52Q9Y366 437 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 GRIP1Q9Y3R0 1128 aa10.43□□□□□ -0.74
LIMS2-210ENST00000413578 DYSFO75923 2080 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 A0A0G2JPF8 293 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 HNRNPCL2B2RXH8 293 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 HNRNPCL3B7ZW38 293 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 MS4A18H0YCH9 400 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 M0R3G1 203 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 RFXANKO14593 260 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 HNRNPCL1O60812 293 aaKnown RBP10.42□□□□□ -0.74
LIMS2-210ENST00000413578 HNRNPCL4P0DMR1 293 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 HLA-DOBP13765 273 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 TCN1P20061 433 aaPredicted RBP10.42□□□□□ -0.74
LIMS2-210ENST00000413578 CRATP43155 626 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 CAPZA2P47755 286 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 DSTNP60981 165 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 ACTG1P63261 375 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 IFFO1Q0D2I5 559 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 C1DQ13901 141 aaKnown RBP10.42□□□□□ -0.74
LIMS2-210ENST00000413578 MPP2Q14168 576 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 MAD2L1BPQ15013 274 aaPredicted RBP10.42□□□□□ -0.74
LIMS2-210ENST00000413578 MS4A18Q3C1V0 323 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 C5orf46Q6UWT4 87 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 H1FNTQ75WM6 255 aaPredicted RBP10.42□□□□□ -0.74
LIMS2-210ENST00000413578 PEG10Q86TG7 708 aaKnown RBP10.42□□□□□ -0.74
LIMS2-210ENST00000413578 COMTD1Q86VU5 262 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 ZNF418Q8TF45 676 aaPredicted RBP10.42□□□□□ -0.74
LIMS2-210ENST00000413578 SLC38A4Q969I6 547 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 LRRC37BQ96QE4 947 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 DENND2DQ9H6A0 471 aaPredicted RBP10.42□□□□□ -0.74
LIMS2-210ENST00000413578 ZNF385DQ9H6B1 395 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 NARFLQ9H6Q4 476 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 TPT1P8Q9HAU6 139 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 BCL2L10Q9HD36 194 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 SSU72Q9NP77 194 aaKnown RBP10.42□□□□□ -0.74
LIMS2-210ENST00000413578 KLHL14Q9P2G3 628 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 PCDHB10Q9UN67 800 aa10.42□□□□□ -0.74
LIMS2-210ENST00000413578 TRAV20A0A0B4J274 112 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 A0A1B0GWA3 101 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 AKAP8O43823 692 aaKnown RBP10.41□□□□□ -0.74
LIMS2-210ENST00000413578 DEAF1O75398 565 aaPredicted RBP10.41□□□□□ -0.74
LIMS2-210ENST00000413578 PNPP00491 289 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 NUDT7P0C024 238 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 BMP2P12643 396 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 EPHA1P21709 976 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 BGNP21810 368 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 HTR2AP28223 471 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 GTF2E2P29084 291 aaKnown RBP10.41□□□□□ -0.74
LIMS2-210ENST00000413578 EPHA3P29320 983 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 GIPRP48546 466 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 MFSD13AQ14CX5 517 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 ZNF311Q5JNZ3 666 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 REP15Q6BDI9 236 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 ZNF813Q6ZN06 617 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 NET1Q7Z628 596 aaPredicted RBP10.41□□□□□ -0.74
LIMS2-210ENST00000413578 ZNF584Q8IVC4 421 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 OR6S1Q8NH40 331 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 AENQ8WTP8 325 aaKnown RBP10.41□□□□□ -0.74
LIMS2-210ENST00000413578 RBM4Q9BWF3 364 aaKnown RBP10.41□□□□□ -0.74
LIMS2-210ENST00000413578 ARMC7Q9H6L4 198 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 THUMPD1Q9NXG2 353 aaKnown RBP10.41□□□□□ -0.74
LIMS2-210ENST00000413578 ZNF232Q9UNY5 417 aa10.41□□□□□ -0.74
LIMS2-210ENST00000413578 PKD1L1Q8TDX9 2849 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 TRAV36DV7A0A075B6V5 113 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 LOC105371242A0A075B767 164 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 A0A087WUJ7 227 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 TRIM77I1YAP6 450 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 TM9SF1O15321 606 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 RGS9O75916 674 aaPredicted RBP10.4□□□□□ -0.74
LIMS2-210ENST00000413578 BGLAPP02818 100 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 IL6P05231 212 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 CD79AP11912 226 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 B4GALT1P15291 398 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 HOXB9P17482 250 aaPredicted RBP10.4□□□□□ -0.74
LIMS2-210ENST00000413578 PRKAR1BP31321 381 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 AQP5P55064 265 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 RPS23P62266 143 aaKnown RBP10.4□□□□□ -0.74
LIMS2-210ENST00000413578 VSNL1P62760 191 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 RAB1AP62820 205 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 PIGFQ07326 219 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 TUSC1Q2TAM9 212 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 TRMT5Q32P41 509 aaKnown RBP10.4□□□□□ -0.74
LIMS2-210ENST00000413578 PDCD4Q53EL6 469 aaKnown RBP10.4□□□□□ -0.74
LIMS2-210ENST00000413578 SHQ1Q6PI26 577 aaKnown RBP10.4□□□□□ -0.74
LIMS2-210ENST00000413578 THSD4Q6ZMP0 1018 aa10.4□□□□□ -0.74
LIMS2-210ENST00000413578 MSANTD1Q6ZTZ1 278 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms