RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 H1FNTQ75WM6 255 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 NET1Q7Z628 596 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 UEVLDQ8IX04 471 aa12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 ZNF418Q8TF45 676 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 SLC38A4Q969I6 547 aa12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 LRRC37BQ96QE4 947 aa12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 EMC6Q9BV81 110 aa12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 TMEM109Q9BVC6 243 aa12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 THUMPD1Q9NXG2 353 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 TREM2Q9NZC2 230 aa12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 GRIP1Q9Y3R0 1128 aa12.25□□□□□ -0.45
HLA-DQB2-229ENST00000411527 LOC102725191A0A1B0GVB3 256 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 MS4A18H0YCH9 400 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 TM9SF1O15321 606 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 RGS16O15492 202 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 TRAF3IP2O43734 574 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 FZD7O75084 574 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 SLC22A3O75751 556 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 HPRP00739 348 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 TFP02787 698 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 MSMBP08118 114 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 ZNF14P17017 642 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 GLRXP35754 106 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 AQP5P55064 265 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 TMEM33P57088 247 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 GALK2Q01415 458 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 BST1Q10588 318 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 SCGB2A2Q13296 93 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 MPP2Q14168 576 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 MAD2L1BPQ15013 274 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 MS4A18Q3C1V0 323 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 GKAP1Q5VSY0 366 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 REP15Q6BDI9 236 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 FAHD2BQ6P2I3 314 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 C5orf46Q6UWT4 87 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 ZNF813Q6ZN06 617 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 LRP11Q86VZ4 500 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 C20orf196Q8IYI0 205 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 C3orf56Q8N813 242 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 AENQ8WTP8 325 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 GCDHQ92947 438 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 SLC35B4Q969S0 331 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 FAHD2AQ96GK7 314 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 ZNF75AQ96N20 296 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 RACGAP1Q9H0H5 632 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 RMND5AQ9H871 391 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 C12orf10Q9HB07 376 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 SSU72Q9NP77 194 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 KCNK9Q9NPC2 374 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 ZNF275Q9NSD4 429 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 FZR1Q9UM11 496 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 POFUT2Q9Y2G5 429 aa12.24□□□□□ -0.45
HLA-DQB2-229ENST00000411527 TRAV36DV7A0A075B6V5 113 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 PPIHO43447 177 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 NUDT7P0C024 238 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 GAAP10253 952 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 HLA-DOBP13765 273 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 NQO1P15559 274 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 EGR1P18146 543 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 GIPRP48546 466 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 PTDSS1P48651 473 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 RAB1AP62820 205 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 MFSD13AQ14CX5 517 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 NXNQ6DKJ4 435 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 C6orf89Q6UWU4 347 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 OR51F2Q8NH61 342 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 MGARPQ8TDB4 240 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 MAL2Q969L2 176 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 YIPF5Q969M3 257 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 VPS33AQ96AX1 596 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 ITCHQ96J02 903 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 TXNDC15Q96J42 360 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 LRR1Q96L50 414 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 PAIP2Q9BPZ3 127 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 BCL2L10Q9HD36 194 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 B3GAT2Q9NPZ5 323 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 MYEF2Q9P2K5 600 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 DUSP13Q9UII6 198 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 PCDHB10Q9UN67 800 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 TENM1Q9UKZ4 2725 aa12.23□□□□□ -0.45
HLA-DQB2-229ENST00000411527 IGKV1D-42A0A075B6H8 117 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 A0A087WUJ7 227 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 A0A1B0GWA3 101 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 TRPC5OSA6NMA1 111 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 HDAC3O15379 428 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 RAB36O95755 333 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 NAT2P11245 290 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 IDO1P14902 403 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 B4GALT1P15291 398 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 HTR2AP28223 471 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 COMPP49747 757 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 LMO4P61968 165 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 RPS23P62266 143 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 RGNQ15493 299 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 FXNQ16595 210 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 PDCD4Q53EL6 469 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 ALG10BQ5I7T1 473 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 C6orf10Q5SRN2 563 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 ZNF627Q7L945 461 aa12.22□□□□□ -0.45
HLA-DQB2-229ENST00000411527 PEG10Q86TG7 708 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms