RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 SEC14L4Q9UDX3 406 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 CLEC2DQ9UHP7 191 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 TEKT2Q9UIF3 430 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 DMXL1Q9Y485 3027 aa4.97□□□□□ -1.61
EPHA4-202ENST00000409854 A0A0G2JMM0 328 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 TEX13CA0A0J9YWL9 993 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 A0A1W2PPB8 328 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 A0A1W2PRS3 328 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 OR6C68A6NDL8 312 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 OR6C65A6NJZ3 312 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 KIR3DP1A8MWS1 328 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 SHISA8B8ZZ34 492 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 ZIC3O60481 467 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 PSMB9P28065 219 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 SRD5A2P31213 254 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 CDKN2AP42771 156 aaKnown RBP4.96□□□□□ -1.61
EPHA4-202ENST00000409854 SSTP61278 116 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 POU4F2Q12837 409 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.96□□□□□ -1.61
EPHA4-202ENST00000409854 SLC6A19Q695T7 634 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 NHLRC1Q6VVB1 395 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 Q6ZNX1 250 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 ZBTB46Q86UZ6 589 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 OR4K13Q8NH42 304 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF417Q8TAU3 575 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 ZPLD1Q8TCW7 415 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 Q96M85 177 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 OPALINQ96PE5 141 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF587Q96SQ5 575 aaPredicted RBP4.96□□□□□ -1.61
EPHA4-202ENST00000409854 ADGRL4Q9HBW9 690 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 INPP5EQ9NRR6 644 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 DEPPQ9NTK1 212 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 STMN3Q9NZ72 180 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 ERGIC3Q9Y282 383 aa4.96□□□□□ -1.61
EPHA4-202ENST00000409854 MS4A18H0YCH9 400 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ATE1O95260 518 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 F13BP05160 661 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 SCG5P05408 212 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 CLUP10909 449 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 CNR1P21554 472 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 DPP4P27487 766 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 PCSK6P29122 969 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 CD96P40200 585 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 HAAOP46952 286 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 P2RY4P51582 365 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 B3GALT5-AS1P59052 145 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 FOXK1P85037 733 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ACSM1Q08AH1 577 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 FOXO1Q12778 655 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 MLLT11Q13015 90 aaPredicted RBP4.96□□□□□ -1.62
EPHA4-202ENST00000409854 MYBPHQ13203 477 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 KRR1Q13601 381 aaKnown RBP4.96□□□□□ -1.62
EPHA4-202ENST00000409854 SPHARQ15513 63 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 MS4A18Q3C1V0 323 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 CDONQ4KMG0 1287 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ABHD17BQ5VST6 288 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 PAQR6Q6TCH4 344 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF600Q6ZNG1 722 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ADCK1Q86TW2 530 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 P2RY8Q86VZ1 359 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ERI1Q8IV48 349 aaKnown RBP4.96□□□□□ -1.62
EPHA4-202ENST00000409854 CYB561A3Q8NBI2 242 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 CLEC1AQ8NC01 280 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 FAM98AQ8NCA5 519 aaKnown RBP4.96□□□□□ -1.62
EPHA4-202ENST00000409854 MDS2Q8NDY4 140 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 OR4F15Q8NGB8 312 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 OR52N1Q8NH53 320 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 NMD3Q96D46 503 aaKnown RBP4.96□□□□□ -1.62
EPHA4-202ENST00000409854 UBL7Q96S82 380 aaPredicted RBP4.96□□□□□ -1.62
EPHA4-202ENST00000409854 NMNAT3Q96T66 252 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 MGLLQ99685 303 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 TIMP4Q99727 224 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 DHRS9Q9BPW9 319 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 MFRPQ9BY79 579 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 OR2B2Q9GZK3 357 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 RNF32Q9H0A6 362 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 TXNIPQ9H3M7 391 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 CHST11Q9NPF2 352 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ERVK13-1Q9NX77 482 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ABI3Q9P2A4 366 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF346Q9UL40 294 aaKnown RBP4.96□□□□□ -1.62
EPHA4-202ENST00000409854 HDGFL3Q9Y3E1 203 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 MUC6Q6W4X9 2439 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 B8ZZF3 427 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 MYL12BO14950 172 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 PMS2P2O95744 297 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 SBK2P0C263 348 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 SPI1P17947 270 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 MYL12AP19105 171 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ITGA3P26006 1051 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 CASRP41180 1078 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 DNASE1L1P49184 302 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 RGS6P49758 472 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 RRADP55042 308 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 WNT4P56705 351 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 RPL27P61353 136 aaKnown RBP4.96□□□□□ -1.62
EPHA4-202ENST00000409854 CLN3Q13286 438 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 AQP6Q13520 282 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 SSX1Q16384 188 aa4.96□□□□□ -1.62
EPHA4-202ENST00000409854 ARMCX4Q5H9R4 360 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms