RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 NUP54Q7Z3B4 507 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 COMMD6Q7Z4G1 85 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 GLRX5Q86SX6 157 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 RIMKLAQ8IXN7 391 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 EID3Q8N140 333 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 ZCCHC7Q8N3Z6 543 aaKnown RBP3.67□□□□□ -1.82
CLK1-203ENST00000409769 TBC1D19Q8N5T2 526 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 LSMEM1Q8N8F7 131 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 BMPERQ8N8U9 685 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 AMER3Q8N944 861 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 FNDC5Q8NAU1 212 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 TMEM178AQ8NBL3 297 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 CAMKVQ8NCB2 501 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 OR10G8Q8NGN5 311 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 OR9I1Q8NGQ6 314 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 SLC13A3Q8WWT9 602 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 TESCQ96BS2 214 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 TM4SF18Q96CE8 201 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 SLC45A3Q96JT2 553 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 TEX37Q96LM6 180 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 C10orf90Q96M02 699 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 FEVQ99581 238 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 DCTN5Q9BTE1 182 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 C1orf50Q9BV19 199 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 EBPLQ9BY08 206 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 CLMPQ9H6B4 373 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 Q9H8V8 135 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 PLCXD1Q9NUJ7 323 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 MRGBPQ9NV56 204 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 NMRK1Q9NWW6 199 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 STUB1Q9UNE7 303 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 PLCL2Q9UPR0 1127 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 EIF3LQ9Y262 564 aaKnown RBP3.67□□□□□ -1.82
CLK1-203ENST00000409769 MRPS2Q9Y399 296 aaKnown RBP3.67□□□□□ -1.82
CLK1-203ENST00000409769 PCDHGA1Q9Y5H4 931 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 SLC22A7Q9Y694 548 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 SDK2Q58EX2 2172 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 AHCTF1Q8WYP5 2266 aa3.67□□□□□ -1.82
CLK1-203ENST00000409769 URADA6NGE7 173 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 PSMD12O00232 456 aaPredicted RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 SAP18O00422 153 aaKnown RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 RTCAO00442 366 aaKnown RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 FBP2O00757 339 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 UBE2CO00762 179 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 TXNDC9O14530 226 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 ERI3O43414 337 aaKnown RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 GALR3O60755 368 aaPredicted RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 SCN2BO60939 215 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 DNAJB6O75190 326 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 SH3BGRLO75368 114 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 EEDO75530 441 aaKnown RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 MYO1DO94832 1006 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 STATHP02808 62 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 KLK1P06870 262 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 CSN3P07498 182 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 NCF2P19878 526 aaPredicted RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 HIST1H1TP22492 207 aaPredicted RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 CALB2P22676 271 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 EEF1B2P24534 225 aaKnown RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 ATP5A1P25705 553 aaKnown RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 RAP1GDS1P52306 607 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 HNRNPFP52597 415 aaKnown RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 MAPK12P53778 367 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 PLA2G16P53816 162 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 MTTPP55157 894 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 CLDN15P56746 228 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 VSX2P58304 361 aaPredicted RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 RAB8AP61006 207 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 TRA2BP62995 288 aaKnown RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 RGS1Q08116 209 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 ZNF763Q0D2J5 394 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 PDE7AQ13946 482 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 FAM53BQ14153 422 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 RCAN2Q14206 197 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 C16orf72Q14CZ0 275 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 CEBPEQ15744 281 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 ZSCAN26Q16670 478 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 DEFB110Q30KQ9 67 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 LACTB2Q53H82 288 aaPredicted RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 COQ5Q5HYK3 327 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 TOR1AIP1Q5JTV8 583 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 TCTE1Q5JU00 501 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 FAM71E1Q6IPT2 247 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 TRIM40Q6P9F5 258 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 PRSS41Q7RTY9 318 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 PAGE2Q7Z2X7 111 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 CENPVQ7Z7K6 275 aaPredicted RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 RTN4RL2Q86UN3 420 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 FAM9CQ8IZT9 166 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 LIX1Q8N485 282 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 KRTCAP2Q8N6L1 136 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 CSNK1A1LQ8N752 337 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 ZNF614Q8N883 585 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 ACOT4Q8N9L9 421 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 OR8J2Q8NGG1 315 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 OR1L3Q8NH93 324 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 C16orf78Q8WTQ4 265 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 RERGQ96A58 199 aaPredicted RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 MUS81Q96NY9 551 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 TSSK3Q96PN8 268 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms