RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 PLK3Q9H4B4 646 aa12.81□□□□□ -0.36
CBX3-203ENST00000409747 INTS9Q9NV88 658 aaKnown RBP12.81□□□□□ -0.36
CBX3-203ENST00000409747 MRPL39Q9NYK5 338 aaKnown RBP12.81□□□□□ -0.36
CBX3-203ENST00000409747 LOC390937A0A1W2PQ73 354 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 ANGPT2O15123 496 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 MFN2O95140 757 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 VIMP08670 466 aaKnown RBP12.8□□□□□ -0.36
CBX3-203ENST00000409747 FAM157CP0CG43 387 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 CBLP22681 906 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 CAPZA2P47755 286 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 GZMKP49863 264 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 IDH3GP51553 393 aaPredicted RBP12.8□□□□□ -0.36
CBX3-203ENST00000409747 POU3F1Q03052 451 aaPredicted RBP12.8□□□□□ -0.36
CBX3-203ENST00000409747 PUDPQ08623 228 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 PMS2P3Q13401 168 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 ADRM1Q16186 407 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 CYP51A1Q16850 503 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 ZNF613Q6PF04 617 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 DHDDSQ86SQ9 333 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 SLC30A8Q8IWU4 369 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 C10orf53Q8N6V4 93 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 ZNF540Q8NDQ6 660 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 RSPO3Q9BXY4 272 aaPredicted RBP12.8□□□□□ -0.36
CBX3-203ENST00000409747 NDUFAF1Q9Y375 327 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 ARFGEF3Q5TH69 2177 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 ALPK2Q86TB3 2170 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 COL6A5A8TX70 2615 aa12.8□□□□□ -0.36
CBX3-203ENST00000409747 HMGB1P1B2RPK0 211 aaPredicted RBP12.79□□□□□ -0.36
CBX3-203ENST00000409747 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 M0R3G1 203 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 LY6HO94772 140 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 MT-ATP6P00846 226 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 BGLAPP02818 100 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 C8BP07358 591 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 CALCRP30988 508 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 CDH12P55289 794 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 NPRL3Q12980 569 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 RUNDC3AQ59EK9 446 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 TTMPQ5BVD1 217 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 DLEU7Q6UYE1 221 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 C20orf196Q8IYI0 205 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 DPP10Q8N608 796 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 PRR14Q9BWN1 585 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 CUBNO60494 3623 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 ZNF726A6NNF4 738 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 MS4A18H0YCH9 400 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 IGHV4-31P0DP07 118 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 ZNF16P17020 682 aaPredicted RBP12.79□□□□□ -0.36
CBX3-203ENST00000409747 NPR2P20594 1047 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 NR4A2P43354 598 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 PCBP3P57721 371 aaKnown RBP12.79□□□□□ -0.36
CBX3-203ENST00000409747 GGTLC2Q14390 218 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 MS4A18Q3C1V0 323 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 CARD17Q5XLA6 110 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 PXKQ7Z7A4 578 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 MDP1Q86V88 176 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 ANKS4BQ8N8V4 417 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 SMYD1Q8NB12 490 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 TSPEARQ8WU66 669 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 MCHR1Q99705 422 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 SIKE1Q9BRV8 207 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 BEX2Q9BXY8 128 aa12.79□□□□□ -0.36
CBX3-203ENST00000409747 IGHV2OR16-5A0A0B4J2B6 119 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 SLC35F4A4IF30 521 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 hCG_2039718K7EN88 272 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 CHP2O43745 196 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 HPRP00739 348 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 CELA3BP08861 270 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 HLA-DOBP13765 273 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 AHCYP23526 432 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 HGFACQ04756 655 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 CARTPTQ16568 116 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 GSG1Q2KHT4 349 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 ZNF627Q7L945 461 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 PATL1Q86TB9 770 aaKnown RBP12.78□□□□□ -0.36
CBX3-203ENST00000409747 OR6N1Q8NGY5 312 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 NEU4Q8WWR8 484 aaPredicted RBP12.78□□□□□ -0.36
CBX3-203ENST00000409747 ZNF837Q96EG3 531 aaPredicted RBP12.78□□□□□ -0.36
CBX3-203ENST00000409747 MAGEB18Q96M61 343 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 MOGAT1Q96PD6 335 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 CGREF1Q99674 301 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 ARHGDIGQ99819 225 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 EMC6Q9BV81 110 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 ULBP2Q9BZM5 246 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 DENND2DQ9H6A0 471 aaPredicted RBP12.78□□□□□ -0.36
CBX3-203ENST00000409747 SEC61A2Q9H9S3 476 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 FBXL3Q9UKT7 428 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 POFUT2Q9Y2G5 429 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 SPEF1Q9Y4P9 236 aa12.78□□□□□ -0.36
CBX3-203ENST00000409747 M0R3H8 397 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 PLPP3O14495 311 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 TPST2O60704 377 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 ENTPD5O75356 428 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 SEC14L2O76054 403 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 OR6A2O95222 327 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 APEHP13798 732 aaKnown RBP12.77□□□□□ -0.36
CBX3-203ENST00000409747 THBS4P35443 961 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 DAG1Q14118 895 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 IQCCQ4KMZ1 466 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 INTS11Q5TA45 600 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms