RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CIB4A0PJX0 185 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 BGLAPP02818 100 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 IGHV3-43DP0DP04 118 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 KRT13P13646 458 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 MUC1P15941 1255 aaPredicted RBP2.15□□□□□ -2.06
PMS1-203ENST00000409593 GNA11P29992 359 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 GANABQ14697 944 aaKnown RBP2.15□□□□□ -2.06
PMS1-203ENST00000409593 RIPPLY2Q5TAB7 128 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 TTC23Q5W5X9 447 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 PLA2G4DQ86XP0 818 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 ARRDC1Q8N5I2 433 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 OR5W2Q8NH69 310 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 AURKBQ96GD4 344 aaPredicted RBP2.15□□□□□ -2.06
PMS1-203ENST00000409593 OXGR1Q96P68 337 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 LRRN3Q9H3W5 708 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 SPATA7Q9P0W8 599 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 XCL2Q9UBD3 114 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 IGSF9BQ9UPX0 1349 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.06
PMS1-203ENST00000409593 CCDC182A6NF36 153 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 INS-IGF2F8WCM5 200 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 IDH1O75874 414 aaKnown RBP2.15□□□□□ -2.07
PMS1-203ENST00000409593 UGT2B4P06133 528 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 ZDHHC11BP0C7U3 371 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 UBTFL1P0CB47 393 aaPredicted RBP2.15□□□□□ -2.07
PMS1-203ENST00000409593 GDI1P31150 447 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 CBX1P83916 185 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 OR5I1Q13606 314 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 PDK4Q16654 411 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 CHRFAM7AQ494W8 412 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 C1orf220Q5T0J3 134 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 TMEM225Q6GV28 225 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 CNIH2Q6PI25 160 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 GET4Q7L5D6 327 aaPredicted RBP2.15□□□□□ -2.07
PMS1-203ENST00000409593 ZDHHC21Q8IVQ6 265 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 ZNF683Q8IZ20 524 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 ANKFN1Q8N957 763 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 VN1R2Q8NFZ6 395 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 TRMT10AQ8TBZ6 339 aaKnown RBP2.15□□□□□ -2.07
PMS1-203ENST00000409593 FGF14Q92915 247 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 UBE2E3Q969T4 207 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 CXorf40BQ96DE9 158 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 UFSP2Q9NUQ7 469 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 BFARQ9NZS9 450 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 PIPOXQ9P0Z9 390 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 POLDIP2Q9Y2S7 368 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 F11RQ9Y624 299 aaKnown RBP2.15□□□□□ -2.07
PMS1-203ENST00000409593 FANCIQ9NVI1 1328 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 CARMIL3Q8ND23 1372 aa2.15□□□□□ -2.07
PMS1-203ENST00000409593 C7orf66A4D0T2 115 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 PRRG1O14668 218 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 XPO1O14980 1071 aaKnown RBP2.14□□□□□ -2.07
PMS1-203ENST00000409593 OMGP23515 440 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 PPT1P50897 306 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 CDC37Q16543 378 aaPredicted RBP2.14□□□□□ -2.07
PMS1-203ENST00000409593 TTLL9Q3SXZ7 439 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 Q5W150 140 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 ZNF880Q6PDB4 577 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 FAM92BQ6ZTR7 304 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 RMI2Q96E14 147 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 OR2A5Q96R48 311 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 MRPL47Q9HD33 250 aaKnown RBP2.14□□□□□ -2.07
PMS1-203ENST00000409593 PALMDQ9NP74 551 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 KCNIP3Q9Y2W7 256 aa2.14□□□□□ -2.07
PMS1-203ENST00000409593 IGHV3-66A0A0C4DH42 116 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 METTL21EPA6NDL7 271 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 HSD17B6O14756 317 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 RPA2P15927 270 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 ERVK-25P63136 954 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 KLRB1Q12918 225 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 DPYSL2Q16555 572 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 FBXW9Q5XUX1 488 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 H2AFVQ71UI9 128 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 ECHDC2Q86YB7 292 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 ZADH2Q8N4Q0 377 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 GEMIN6Q8WXD5 167 aaKnown RBP2.13□□□□□ -2.07
PMS1-203ENST00000409593 PDXPQ96GD0 296 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 SENP8Q96LD8 212 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 CD84Q9UIB8 345 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 GPR179Q6PRD1 2367 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 HIVEP2P31629 2446 aa2.13□□□□□ -2.07
PMS1-203ENST00000409593 MN1Q10571 1320 aaPredicted RBP2.12□□□□□ -2.07
PMS1-203ENST00000409593 TRAV40A0A0B4J280 105 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 IGHV5-51A0A0C4DH38 117 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 OR5B21A6NL26 309 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 TOM1O60784 492 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 VAMP5O95183 116 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 ADRA2AP08913 450 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 PRPS2P11908 318 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 PSMC3P17980 439 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 RAP1AP62834 184 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 NCBP1Q09161 790 aaKnown RBP2.12□□□□□ -2.07
PMS1-203ENST00000409593 KLHL30Q0D2K2 578 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 SHISA6Q6ZSJ9 500 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 ZNF679Q8IYX0 411 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 MYOCDQ8IZQ8 938 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 SDR42E1Q8WUS8 393 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 SMARCD2Q92925 531 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 LRRC58Q96CX6 371 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 GABARAPL3Q9BY60 117 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms