RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TRAPPC13A5PLN9 417 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 HTR3EA5X5Y0 456 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 ZNF99A8MXY4 864 aaPredicted RBP12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 PDE5AO76074 875 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 OR6A2O95222 327 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 IGF2P01344 180 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 IGKV3-15P01624 115 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 IGLV1-44P01699 117 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 CSF3P09919 207 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 CD247P20963 164 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 GZMMP51124 257 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 IL1RL1Q01638 556 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 ZP4Q12836 540 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 ENTPD8Q5MY95 495 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 ZNF627Q7L945 461 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 C20orf196Q8IYI0 205 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 C10orf53Q8N6V4 93 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 OR6T1Q8NGN1 323 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 OR5J2Q8NH18 312 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 ADAMTS16Q8TE57 1224 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 PROX1Q92786 737 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 ALKBH3Q96Q83 286 aaPredicted RBP12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 OR2M2Q96R28 347 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 CACNG6Q9BXT2 260 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 CCDC134Q9H6E4 229 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 CRLF2Q9HC73 371 aa12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 NSD1Q96L73 2696 aaPredicted RBP12.68□□□□□ -0.38
NIF3L1-205ENST00000409588 FBP2O00757 339 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 PLPP3O14495 311 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 TRAF3IP2O43734 574 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 MGRN1O60291 552 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 F12P00748 615 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 TP53P04637 393 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 HIST1H2ABP04908 130 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 ACVR1BP36896 505 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 NUDT6P53370 316 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 ARF1P84077 181 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 SLC25A3Q00325 362 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 KLF10Q13118 480 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 SELPLGQ14242 412 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 NPTX1Q15818 432 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 NHLRC1Q6VVB1 395 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 HIST3H2AQ7L7L0 130 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 CALHM3Q86XJ0 350 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 TMEM123Q8N131 208 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 OR10H5Q8NGA6 315 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 HIST1H2ACQ93077 130 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 MED4Q9NPJ6 270 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 SAR1AQ9NR31 198 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 NANSQ9NR45 359 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 ZNF229Q9UJW7 825 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 FBXL3Q9UKT7 428 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 USP22Q9UPT9 525 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 MOKQ9UQ07 419 aa12.67□□□□□ -0.38
NIF3L1-205ENST00000409588 IGHV1-18A0A0C4DH31 117 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 SLC35F4A4IF30 521 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 B9A039 149 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 TLX2O43763 284 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 SSX4O60224 188 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 THRBP10828 461 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 SLC25A16P16260 332 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 AHCYP23526 432 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 SERPINF1P36955 418 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 RBM34P42696 430 aaKnown RBP12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 EFNA4P52798 201 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 SWI5Q1ZZU3 235 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 CEACAM16Q2WEN9 425 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 CLEC2AQ6UVW9 174 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 Q71RC1 249 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 LINGO2Q7L985 606 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 NUP37Q8NFH4 326 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 GPR32P1Q8NGA4 272 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 TAMM41Q96BW9 452 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 MOGAT1Q96PD6 335 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 WFDC6Q9BQY6 131 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 ZNF426Q9BUY5 554 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 HEATR1Q9H583 2144 aaKnown RBP12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 MYOZ1Q9NP98 299 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 FGFR1OP2Q9NVK5 253 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 SEC14L4Q9UDX3 406 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 HIVEP2P31629 2446 aa12.66□□□□□ -0.38
NIF3L1-205ENST00000409588 A0A096LPE4 126 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 A0A1W2PPZ6 126 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 ATP6V1G2-DDX39BF2Z307 99 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 M0R3H8 397 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 MRASO14807 208 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 AVPP01185 164 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 ADORA3P0DMS8 318 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 IFNA8P32881 189 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 SNRPD2P62316 118 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 NAAAQ02083 359 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 POU3F1Q03052 451 aaPredicted RBP12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 LGALS3BPQ08380 585 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 SPOCK1Q08629 439 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 EFNB3Q15768 340 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 ZNF74Q16587 644 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 B3GLCTQ6Y288 498 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 PIWIL3Q7Z3Z3 882 aaKnown RBP12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 ARPINQ7Z6K5 226 aa12.65□□□□□ -0.38
NIF3L1-205ENST00000409588 OR6N1Q8NGY5 312 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms