RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 PPIL3Q9H2H8 161 aaKnown RBP23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 LRFN1Q9P244 771 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 DOK2O60496 412 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 UPK1BO75841 260 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 SLC1A3P43003 542 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 TMEM207Q6UWW9 146 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 GLB1L2Q8IW92 636 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 PM20D2Q8IYS1 436 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 OR2T35Q8NGX2 323 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 DPM1O60762 260 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 TSPAN15O95858 294 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 IL2RAP01589 272 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 GABRA5P31644 462 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 KIR2DL3P43628 341 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 ZNF92Q03936 586 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 TMEM71Q6P5X7 295 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 KCNG3Q8TAE7 436 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 ZBTB8AQ96BR9 441 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 SARAFQ96BY9 339 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 GCM1Q9NP62 436 aa23.08■■□□□ 1.29
SPIRE1-202ENST00000409402 MKRN2OSH3BPM6 223 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 ZNF701M0R085 212 aaPredicted RBP23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 IFNA4P05014 189 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 LCN10Q6JVE6 187 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 FAM117AQ9C073 453 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 LILRB5O75023 590 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 PAHP00439 452 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 ARNTP27540 789 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 NOVA1P51513 510 aaKnown RBP23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 LGALS4P56470 323 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 SLC10A1Q14973 349 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 SDSLQ96GA7 329 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 CHRNA9Q9UGM1 479 aa23.08■■□□□ 1.28
SPIRE1-202ENST00000409402 ACOD1A6NK06 481 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 P2RY10O00398 339 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 PPIAP62937 165 aaKnown RBP23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 OTUD1Q5VV17 481 aaPredicted RBP23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 GPR155Q7Z3F1 870 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 ZNF808Q8N4W9 903 aaPredicted RBP23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 SLC25A31Q9H0C2 315 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 Q499Y3 187 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 AADACL3Q5VUY0 350 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 PRICKLE2Q7Z3G6 844 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 BCORP1Q8N888 145 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 DMBX1Q8NFW5 382 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 HSPB6O14558 160 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 ATP6V1G1O75348 118 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 ARHGAP11BQ3KRB8 267 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 SLC35D3Q5M8T2 416 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 RAB3CQ96E17 227 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 OR52A5Q9H2C5 316 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 NRIP3Q9NQ35 241 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 CLDN6P56747 220 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 TNK1Q13470 666 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 DUSP7Q16829 419 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 CSF3RQ99062 836 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 LIN7BQ9HAP6 207 aa23.07■■□□□ 1.28
SPIRE1-202ENST00000409402 A0A1W2PR48 441 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 NOTOA8MTQ0 251 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 H7C2Y5 167 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 KCNK2O95069 426 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 VAMP5O95183 116 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 IL3RAP26951 378 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 HTR1FP30939 366 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 SGK3Q96BR1 496 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 A0A1B0GUL6 1792 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 PMS2P1A4D2B8 440 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 OPRL1P41146 370 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 SLC14A1Q13336 389 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 LILRA2Q8N149 483 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 C8orf44Q96CB5 159 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 FBXO7Q9Y3I1 522 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 GPX2P18283 190 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 ACKR4Q9NPB9 350 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 YARS2Q9Y2Z4 477 aaKnown RBP23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 CA13Q8N1Q1 262 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 TIMD4Q96H15 378 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 MFRPQ9BY79 579 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 SEMA4CQ9C0C4 833 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 AMBRA1Q9C0C7 1298 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 PCED1AQ9H1Q7 454 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 ARPC5O15511 151 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 CTSLP07711 333 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 ZNF136P52737 540 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 RAB4BP61018 213 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 FOXC1Q12948 553 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 BPIFB2Q8N4F0 458 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 POC1BQ8TC44 478 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 SELENOIQ9C0D9 397 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 CPNE5Q9HCH3 593 aa23.06■■□□□ 1.28
SPIRE1-202ENST00000409402 TJP1Q07157 1748 aa23.05■■□□□ 1.28
SPIRE1-202ENST00000409402 PIP5K1CO60331 668 aa23.05■■□□□ 1.28
SPIRE1-202ENST00000409402 FZD7O75084 574 aa23.05■■□□□ 1.28
SPIRE1-202ENST00000409402 GPR3P46089 330 aa23.05■■□□□ 1.28
SPIRE1-202ENST00000409402 GAB1Q13480 694 aa23.05■■□□□ 1.28
SPIRE1-202ENST00000409402 HLA-BQ31612 363 aa23.05■■□□□ 1.28
SPIRE1-202ENST00000409402 SAXO2Q658L1 398 aa23.05■■□□□ 1.28
SPIRE1-202ENST00000409402 CPEB3Q8NE35 698 aaKnown RBP23.05■■□□□ 1.28
SPIRE1-202ENST00000409402 NOX3Q9HBY0 568 aa23.05■■□□□ 1.28
SPIRE1-202ENST00000409402 TMEM30AQ9NV96 361 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms