RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ZC3HAV1Q7Z2W4 902 aaKnown RBP25.99■■□□□ 1.75
USP42-202ENST00000404008 LUZP2Q86TE4 346 aa25.99■■□□□ 1.75
USP42-202ENST00000404008 ZNF610Q8N9Z0 462 aa25.99■■□□□ 1.75
USP42-202ENST00000404008 LRRC75AQ8NAA5 344 aa25.99■■□□□ 1.75
USP42-202ENST00000404008 SEMA6AQ9H2E6 1030 aa25.99■■□□□ 1.75
USP42-202ENST00000404008 INIPQ9NRY2 104 aa25.99■■□□□ 1.75
USP42-202ENST00000404008 RCE1Q9Y256 329 aa25.99■■□□□ 1.75
USP42-202ENST00000404008 MAGED1Q9Y5V3 778 aaPredicted RBP25.99■■□□□ 1.75
USP42-202ENST00000404008 NKX2-6A6NCS4 301 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 A8MXE2 369 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 IFNGR1P15260 489 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 ASCL1P50553 236 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 FXYD6P3P58550 94 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 SLC35D2Q76EJ3 337 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 ZNF100Q8IYN0 542 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 GTPBP3Q969Y2 492 aaKnown RBP25.98■■□□□ 1.75
USP42-202ENST00000404008 APH1AQ96BI3 265 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 TXNDC15Q96J42 360 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 KCNJ16Q9NPI9 418 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 MED29Q9NX70 200 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 ADGRG4Q8IZF6 3080 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 HCFC1P51610 2035 aa25.98■■□□□ 1.75
USP42-202ENST00000404008 ZNF432O94892 652 aa25.97■■□□□ 1.75
USP42-202ENST00000404008 ADAP00813 363 aa25.97■■□□□ 1.75
USP42-202ENST00000404008 SELENOPP49908 381 aa25.97■■□□□ 1.75
USP42-202ENST00000404008 NIPAL3Q6P499 406 aa25.97■■□□□ 1.75
USP42-202ENST00000404008 SMARCD3Q6STE5 483 aa25.97■■□□□ 1.75
USP42-202ENST00000404008 STK32CQ86UX6 486 aa25.97■■□□□ 1.75
USP42-202ENST00000404008 FANK1Q8TC84 345 aa25.97■■□□□ 1.75
USP42-202ENST00000404008 NIPSNAP1Q9BPW8 284 aa25.97■■□□□ 1.75
USP42-202ENST00000404008 A0A1W2PRG6 482 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 NPIPB13A6NJU9 1138 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 NPIPB4C9JG80 1138 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 G3V2T6 193 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 RRP9O43818 475 aaKnown RBP25.96■■□□□ 1.75
USP42-202ENST00000404008 AKAP8O43823 692 aaKnown RBP25.96■■□□□ 1.75
USP42-202ENST00000404008 NDUFB2O95178 105 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 PRKACGP22612 351 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 TAF11Q15544 211 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 FBXL19-AS1Q494R0 122 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 ZNF474Q6S9Z5 364 aaPredicted RBP25.96■■□□□ 1.75
USP42-202ENST00000404008 IGFN1Q86VF2 1251 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 HIPK1Q86Z02 1210 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 OR2M2Q96R28 347 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 ENKD1Q9H0I2 346 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 PRSS50Q9UI38 385 aa25.96■■□□□ 1.75
USP42-202ENST00000404008 MCIDASD6RGH6 385 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 ZNF23P17027 643 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 GSTM3P21266 225 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 TFF3Q07654 80 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 CD300LDQ6UXZ3 194 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 THSD4Q6ZMP0 1018 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 ZNF620Q6ZNG0 422 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 ZDHHC13Q8IUH4 622 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 WDFY1Q8IWB7 410 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 TMEM123Q8N131 208 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 SVOPLQ8N434 492 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 EMC6Q9BV81 110 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 NDEL1Q9GZM8 345 aa25.95■■□□□ 1.75
USP42-202ENST00000404008 SPTBN1Q01082 2364 aaKnown RBP25.95■■□□□ 1.74
USP42-202ENST00000404008 SLC35F4A4IF30 521 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 IGHMP01871 453 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 RPL4P36578 427 aaKnown RBP25.95■■□□□ 1.74
USP42-202ENST00000404008 DAP3P51398 398 aaKnown RBP25.95■■□□□ 1.74
USP42-202ENST00000404008 BIDP55957 195 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 CTXN1P60606 82 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 ELF3P78545 371 aaPredicted RBP25.95■■□□□ 1.74
USP42-202ENST00000404008 MELKQ14680 651 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 ACKR1Q16570 336 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 RASSF6Q6ZTQ3 369 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 KIF18BQ86Y91 864 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 ADAD1Q96M93 576 aaKnown RBP25.95■■□□□ 1.74
USP42-202ENST00000404008 GPX7Q96SL4 187 aaPredicted RBP25.95■■□□□ 1.74
USP42-202ENST00000404008 OR52D1Q9H346 318 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 TXNIPQ9H3M7 391 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 IL20RAQ9UHF4 553 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 OAZ3Q9UMX2 235 aa25.95■■□□□ 1.74
USP42-202ENST00000404008 BCL10O95999 233 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 ANXA8P13928 327 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 COX10Q12887 443 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 RFX4Q33E94 735 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 TSPO2Q5TGU0 170 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 FAHD1Q6P587 224 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 BEND4Q6ZU67 534 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 PQLC1Q8N2U9 271 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 OR6X1Q8NH79 312 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 ASB10Q8WXI3 467 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 KATNB1Q9BVA0 655 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 RBM24Q9BX46 236 aaKnown RBP25.94■■□□□ 1.74
USP42-202ENST00000404008 GABARAPL1Q9H0R8 117 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 SLCO5A1Q9H2Y9 848 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 EGLN3Q9H6Z9 239 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 CDH10Q9Y6N8 788 aa25.94■■□□□ 1.74
USP42-202ENST00000404008 CNOT4O95628 575 aaKnown RBP25.93■■□□□ 1.74
USP42-202ENST00000404008 IGHV3-9P01782 118 aa25.93■■□□□ 1.74
USP42-202ENST00000404008 CD14P08571 375 aa25.93■■□□□ 1.74
USP42-202ENST00000404008 ARMC4Q5T2S8 1044 aa25.93■■□□□ 1.74
USP42-202ENST00000404008 FBXW9Q5XUX1 488 aa25.93■■□□□ 1.74
USP42-202ENST00000404008 ANKRD34AQ69YU3 496 aa25.93■■□□□ 1.74
USP42-202ENST00000404008 KLHL17Q6TDP4 642 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms