RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 MST1LQ2TV78 715 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 TRMT5Q32P41 509 aaKnown RBP13.36□□□□□ -0.27
TPM1-207ENST00000403994 MS4A18Q3C1V0 323 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 PHYHD1Q5SRE7 291 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 CARD17Q5XLA6 110 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 WDR88Q6ZMY6 472 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 WDFY1Q8IWB7 410 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 SLC30A8Q8IWU4 369 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 FAM169BQ8N8A8 192 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 OR6T1Q8NGN1 323 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 TAMM41Q96BW9 452 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 FBXO17Q96EF6 278 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 MCHR1Q99705 422 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 TMEM120AQ9BXJ8 343 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 CA10Q9NS85 328 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 MED29Q9NX70 200 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 MRPL39Q9NYK5 338 aaKnown RBP13.36□□□□□ -0.27
TPM1-207ENST00000403994 SVEP1Q4LDE5 3571 aa13.36□□□□□ -0.27
TPM1-207ENST00000403994 RTTNQ86VV8 2226 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 CPSF4LA6NMK7 179 aaKnown RBP13.35□□□□□ -0.27
TPM1-207ENST00000403994 ZNF99A8MXY4 864 aaPredicted RBP13.35□□□□□ -0.27
TPM1-207ENST00000403994 M0R3G1 203 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 FXYD1O00168 92 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 FBP2O00757 339 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 CRLF1O75462 422 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 LY6HO94772 140 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 LYPD3O95274 346 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 MT-ATP6P00846 226 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 C8BP07358 591 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 CSF3P09919 207 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
TPM1-207ENST00000403994 IDH3GP51553 393 aaPredicted RBP13.35□□□□□ -0.27
TPM1-207ENST00000403994 EFNA4P52798 201 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 CRYBA2P53672 197 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 SNRPD2P62316 118 aaKnown RBP13.35□□□□□ -0.27
TPM1-207ENST00000403994 PMS2P3Q13401 168 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 ADIPOQQ15848 244 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 ENTPD8Q5MY95 495 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 PATL1Q86TB9 770 aaKnown RBP13.35□□□□□ -0.27
TPM1-207ENST00000403994 TSPYL5Q86VY4 417 aaPredicted RBP13.35□□□□□ -0.27
TPM1-207ENST00000403994 C20orf196Q8IYI0 205 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 C10orf53Q8N6V4 93 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 OR4D11Q8NGI4 311 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 OR10A6Q8NH74 314 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 VANGL1Q8TAA9 524 aaPredicted RBP13.35□□□□□ -0.27
TPM1-207ENST00000403994 FAM168AQ92567 244 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 SORCS2Q96PQ0 1159 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 EMC6Q9BV81 110 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 NOX1Q9Y5S8 564 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 PMF1-BGLAPU3KQ54 211 aa13.35□□□□□ -0.27
TPM1-207ENST00000403994 M0QX08 132 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 PLPP3O14495 311 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 TLX2O43763 284 aaPredicted RBP13.34□□□□□ -0.27
TPM1-207ENST00000403994 GPRIN2O60269 458 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 SERPINI2O75830 405 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 PDE5AO76074 875 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 THY1P04216 161 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 SLC25A16P16260 332 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 GZMMP51124 257 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 NPRL3Q12980 569 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 METTL21CQ5VZV1 264 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 NHLRC1Q6VVB1 395 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 LINC00114Q6XXX2 140 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 MDP1Q86V88 176 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 RBM45Q8IUH3 476 aaKnown RBP13.34□□□□□ -0.27
TPM1-207ENST00000403994 NUP37Q8NFH4 326 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 OR5J2Q8NH18 312 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 ADAMTS16Q8TE57 1224 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 C10orf105Q8TEF2 133 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 NANOS1Q8WY41 292 aaKnown RBP13.34□□□□□ -0.27
TPM1-207ENST00000403994 PCDHAC1Q9H158 963 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 FKBP7Q9Y680 259 aa13.34□□□□□ -0.27
TPM1-207ENST00000403994 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.33□□□□□ -0.285e-6■■■□□ 16.3
TPM1-207ENST00000403994 IGHV2OR16-5A0A0B4J2B6 119 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 SLC35F4A4IF30 521 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 OR4A8P0C604 315 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 CBR1P16152 277 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 SERPINF1P36955 418 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 CAPZA2P47755 286 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 LOXL1Q08397 574 aaPredicted RBP13.33□□□□□ -0.28
TPM1-207ENST00000403994 EFNB3Q15768 340 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 ZNF74Q16587 644 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 VMACQ2NL98 169 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 TMEM249Q2WGJ8 235 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 RABL3Q5HYI8 236 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 INTS11Q5TA45 600 aaKnown RBP13.33□□□□□ -0.28
TPM1-207ENST00000403994 VHLLQ6RSH7 139 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 SLC46A3Q7Z3Q1 461 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 PXKQ7Z7A4 578 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 OR4F15Q8NGB8 312 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 TXNDC15Q96J42 360 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 LRR1Q96L50 414 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 ZNF426Q9BUY5 554 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 ULBP2Q9BZM5 246 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 NOX3Q9HBY0 568 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 FGFR1OP2Q9NVK5 253 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 SLC7A7Q9UM01 511 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 USP22Q9UPT9 525 aa13.33□□□□□ -0.28
TPM1-207ENST00000403994 TRAPPC13A5PLN9 417 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 C11orf98E9PRG8 122 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms