RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TSPAN32Q96QS1 320 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 TAAR6Q96RI8 345 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 SMAD5Q99717 465 aaKnown RBP10.49□□□□□ -0.73
SKA3-203ENST00000400018 NAA50Q9GZZ1 169 aaKnown RBP10.49□□□□□ -0.73
SKA3-203ENST00000400018 ZFP64Q9NPA5 681 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.49□□□□□ -0.73
SKA3-203ENST00000400018 TVP23AA6NH52 213 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 ZSCAN5BA6NJL1 495 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 E9PQ18 207 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 MS4A18H0YCH9 400 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 ARHGEF9O43307 516 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 ICMTO60725 284 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 MPZL1O95297 269 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 LCKP06239 509 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 GUSBP08236 651 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 CNR1P21554 472 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 NTF4P34130 210 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 CASRP41180 1078 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 NR4A2P43354 598 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 B3GALT5-AS1P59052 145 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 CDC42P60953 191 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 TUBA1BP68363 451 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 PMS2P3Q13401 168 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 CARTPTQ16568 116 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 MS4A18Q3C1V0 323 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 C12orf73Q69YU5 71 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 TUBA1AQ71U36 451 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 BTLAQ7Z6A9 289 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 ARMC10Q8N2F6 343 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 LSM14AQ8ND56 463 aaKnown RBP10.49□□□□□ -0.73
SKA3-203ENST00000400018 OR2T33Q8NG76 320 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 OR5M9Q8NGP3 310 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 APOL4Q9BPW4 351 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 RPRD1BQ9NQG5 326 aaKnown RBP10.49□□□□□ -0.73
SKA3-203ENST00000400018 SDHAF3Q9NRP4 125 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 ASB6Q9NWX5 421 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 TP53TG5Q9Y2B4 290 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 H3BMQ9 156 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 CDK2AP1O14519 115 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 CXCL13O43927 109 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 AHSA1O95433 338 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 CRYZL1O95825 349 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 IFNGR2P38484 337 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 NAA10P41227 235 aaPredicted RBP10.48□□□□□ -0.73
SKA3-203ENST00000400018 CENPAP49450 140 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 KEAP1Q14145 624 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 MOGQ16653 247 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 MEP1BQ16820 701 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 GPR107Q5VW38 600 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 LHFPL3Q86UP9 236 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 SNX29P2Q8IUI4 249 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 ZNF511Q8NB15 262 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 TMEM234Q8WY98 164 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 COG8Q96MW5 612 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 FRMD6Q96NE9 622 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 ZNF582Q96NG8 517 aaPredicted RBP10.48□□□□□ -0.73
SKA3-203ENST00000400018 POLDIP3Q9BY77 421 aaKnown RBP10.48□□□□□ -0.73
SKA3-203ENST00000400018 TP63Q9H3D4 680 aaPredicted RBP10.48□□□□□ -0.73
SKA3-203ENST00000400018 ANKRD19PQ9H560 264 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 ZNF703Q9H7S9 590 aaPredicted RBP10.48□□□□□ -0.73
SKA3-203ENST00000400018 TRAV36DV7A0A075B6V5 113 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 A0A087WV48 116 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 ARRDC5A6NEK1 342 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 FTCDNL1E5RQL4 147 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 CBR3O75828 277 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 SEC14L2O76054 403 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 INMTO95050 263 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 PSKH1P11801 424 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 IFNGR1P15260 489 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 ZNF182P17025 639 aaPredicted RBP10.48□□□□□ -0.73
SKA3-203ENST00000400018 TGFBR1P36897 503 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 AGFG1P52594 562 aaKnown RBP10.48□□□□□ -0.73
SKA3-203ENST00000400018 SMSP52788 366 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 MFAP5Q13361 173 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 CAMK2DQ13557 499 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 OXA1LQ15070 435 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 FAM69AQ5T7M9 428 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 GTF2IRD2BQ6EKJ0 949 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 LEG1Q6P5S2 330 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 IGF2-ASQ6U949 168 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 GTF2IRD2Q86UP8 949 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 PM20D2Q8IYS1 436 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 ZFP41Q8N8Y5 198 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 OR52L1Q8NGH7 329 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 OR51G2Q8NGK0 314 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 POP5Q969H6 163 aaKnown RBP10.48□□□□□ -0.73
SKA3-203ENST00000400018 PSD2Q9BQI7 771 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 SYT4Q9H2B2 425 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 EXO5Q9H790 373 aa10.48□□□□□ -0.73
SKA3-203ENST00000400018 IGSF10Q6WRI0 2623 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 NPIPA5E9PKD4 350 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 SULT2B1O00204 365 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 DOK2O60496 412 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 ADRB1P08588 477 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 RRADP55042 308 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 DSCR4P56555 118 aaPredicted RBP10.47□□□□□ -0.73
SKA3-203ENST00000400018 ST3GAL4Q11206 333 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 ACKR1Q16570 336 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 MESTQ5EB52 335 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 BROXQ5VW32 411 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms